Sphingobacterium sp. B29: BV902_24390
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Entry
BV902_24390 CDS
T04670
Name
(GenBank) pseudouridine synthase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
sphn
Sphingobacterium sp. B29
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphn03009
]
BV902_24390
Enzymes [BR:
sphn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
BV902_24390
Ribosome biogenesis [BR:
sphn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BV902_24390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
PrmA
TRM5-TYW2_MTfase
FtsJ
PUA
Methyltransf_10
Methyltr_RsmB-F
TRM
Motif
Other DBs
NCBI-ProteinID:
APU99069
LinkDB
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Position
complement(5675273..5676460)
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AA seq
395 aa
AA seq
DB search
MKSVYLNKGKDKAAWQLHPWVFSGAIKSLSDKIEDGEVVGVYNAEREFIAYGLFHNSSRV
AIRLLEWNPQAQIDADWWRARVQKAVAARQHLLQEGVTNTVRLIFAEADFLPGLIADKYA
DFISIQIHSVGVEKVKSIIIDELNALLQPKGIYERSDLKSREHEGLPDTNGLLFGELPSE
FVDVIENGIHYKVNIIDGQKSGFYCDQRENRQLTANYVLNKRVLDCFCYSGGFTLNSLKS
GAAEVISVDSSALAIETLEKNIVENGFEPSRHKAILSDVNKQLRKFIDEGEKFDLIVLDP
PKYAPSRSALERASRAYKDLNRRGLMLLNSGGLLATFSCSGAMDMDTFKQVLAWAALDAG
KEIQFIRQFHQPEDHPVRASFPEGEYLKGLLVRVL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagtttatttgaataagggtaaggataaagctgcctggcaattgcatccttgg
gtattttctggagcaattaaatcattgtccgataaaattgaagatggcgaagttgttggc
gtttacaatgctgaacgtgaatttattgcctatggtctatttcacaatagctcgcgtgta
gccattcgtttattggagtggaaccctcaagcacagattgatgcagattggtggcgtgcc
cgagttcagaaggctgttgcagcaagacagcatctgttgcaagaaggcgttaccaataca
gttcgtttaatctttgctgaagcagattttcttcctggacttattgcagataaatacgca
gattttatatccattcagattcattcagttggggtggaaaaagtcaaatccattattata
gatgaattgaatgctttgctgcaacccaaaggaatttatgagcgcagtgatctgaaatcc
cgcgaacatgaaggattacccgataccaatggacttttgtttggagaacttccatctgaa
tttgtcgacgttatcgaaaatggcattcattataaggttaacattattgatgggcaaaaa
tcgggattttattgcgaccaacgtgaaaatcgccagctaacggccaactacgttttgaat
aaacgagtcctagattgtttctgctattccggtggttttacgttaaatagtttgaaaagt
ggcgctgcagaagtcatatctgtagatagttctgcactggctattgaaaccctggaaaag
aatattgttgaaaatggttttgaacctagtcgacataaagcaatattgtctgatgtaaac
aagcaattgcgtaaattcattgatgaaggggaaaaatttgatctgattgtcctggatcca
ccgaaatatgcaccctctcgatctgcattggaaagagcatcaagggcgtataaagacctg
aatcgccgcggattgatgttgttaaatagcggtggtttattagcgacattttcttgttca
ggtgcgatggatatggatacgttcaaacaagtgctcgcttgggctgcactggatgccggt
aaggaaattcagtttatcagacaatttcatcaacctgaagaccatcctgtccgggcctcg
ttccccgaaggtgaatatctgaaaggattgttggtacgcgtattgtaa
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