Sphingobacterium sp. B29: BV902_24420
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Entry
BV902_24420 CDS
T04670
Name
(GenBank) hypothetical protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sphn
Sphingobacterium sp. B29
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphn01011
]
BV902_24420
Enzymes [BR:
sphn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BV902_24420
Peptidoglycan biosynthesis and degradation proteins [BR:
sphn01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BV902_24420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
LysM1_NFP_LYK
HTH_10
DUF4145
Motif
Other DBs
NCBI-ProteinID:
APU99072
LinkDB
All DBs
Position
complement(5683298..5684764)
Genome browser
AA seq
488 aa
AA seq
DB search
MIGKQTLISILGGVCYVLPLMAQESAVEGMKEAAHTFFQKSIEKEKQEIYQYLDSIKSSG
NNGKHDAEITDEDIQLVRKLKAIEREVPLDYSPRVKDLVAKYTSDNYNPYMCRMMGLGQY
YFPLFDKIMDEVGVPRELKYLSVVESSLNPRDISSAGATGLWQLMYYEAKTYHLTVDTYT
DQRMDPIASSYAIAKILKEAYDEYGDWLLAIASYNGGKGAVSRAIQRSGKEKATFWDIAP
YLTQQTQNYIPKFIAMTYAMKYADENDISAADTELSLRTQALDINKRISLNQIADALHVS
KETLRALNPSFKRNVLNGTEESPLRLVLPVLDKKIASEELYAALNTPISSTTLSQTENLS
EPLQNGKYKVKVGETFASIADKFEVTVQDIKSWNNLRGNQIVPGQNLLIKKEDDFVNAKL
ARNTERSSKKSQQRAASTTRTAYYVVKKGDTLSEIADKNGTSVGRLKSENDLNGSRIKPG
MKLKVSKK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatcggaaaacagacgttaatttcaatactaggaggggtatgctatgtactaccactc
atggcccaagaaagcgctgtagaaggcatgaaagaagccgcccataccttctttcaaaaa
agtatcgaaaaagaaaaacaagagatttaccaataccttgacagtataaaatcttccgga
aataacgggaagcatgatgctgaaattacagatgaagatatacagctcgtgcggaaactg
aaagcaatagaacgtgaggttccattggactactcaccgcgagtgaaagatctggttgct
aaatatacgtcggataattataacccttatatgtgtaggatgatgggactagggcaatac
tatttcccattgtttgataaaatcatggatgaagttggagtgccacgggaactcaaatat
ctaagtgtagtcgaatcatcattaaatccacgcgatatctccagtgctggagcaacaggc
ttatggcaattgatgtattatgaagccaaaacttatcatcttacagtggacacttatacc
gaccaacgtatggatccgattgcttctagttatgctatcgcaaaaatcttaaaagaagct
tacgatgaatatggcgattggctattagcgatagcgtcctataatggcggtaaaggggct
gttagccgtgcgatccaacgttcgggaaaagagaaagctactttttgggatatcgcacca
tatctaacgcaacagacccaaaactatatccctaagttcatcgcaatgacctatgcgatg
aaatatgcggatgaaaatgatatcagtgctgcggatactgaactttcactaagaactcaa
gcattagatatcaataaacggatttcactgaaccaaatagcggatgctttacatgtctca
aaagagacattacgtgcattgaatcctagttttaaaagaaatgtgttaaatggcactgaa
gagtctccattgcggttagttttacctgtcttggataaaaagattgcctcagaagaattg
tatgcagctctcaacacgccaatatcttctacaactcttagtcagacggaaaatctgagt
gagcctctacaaaatggcaaatataaagtgaaagttggtgagacattcgcttccattgct
gacaagtttgaagtaacagtacaggatataaaatcgtggaataacctgcgcggaaatcaa
attgtccctggacaaaacttgctgataaaaaaggaggatgatttcgttaacgcgaaatta
gcgcgtaacacagaaaggtcttcaaagaagagtcaacagcgtgccgctagtactacacgt
acagcttactatgtcgtgaagaaaggcgataccctatctgagatcgcagataaaaatggt
acatcagtcggtcgacttaaaagtgaaaatgatttaaatggaagccggataaaaccgggg
atgaaattgaaagtctcaaagaaataa
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