Sphingobacterium sp. B29: BV902_24530
Help
Entry
BV902_24530 CDS
T04670
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sphn
Sphingobacterium sp. B29
Pathway
sphn00250
Alanine, aspartate and glutamate metabolism
sphn00310
Lysine degradation
sphn00350
Tyrosine metabolism
sphn00650
Butanoate metabolism
sphn00760
Nicotinate and nicotinamide metabolism
sphn01100
Metabolic pathways
sphn01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BV902_24530 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BV902_24530 (gabD)
00310 Lysine degradation
BV902_24530 (gabD)
00350 Tyrosine metabolism
BV902_24530 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BV902_24530 (gabD)
Enzymes [BR:
sphn01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BV902_24530 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BV902_24530 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BV902_24530 (gabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
PCP
DUF4198
Motif
Other DBs
NCBI-ProteinID:
APU99091
LinkDB
All DBs
Position
5704081..5705514
Genome browser
AA seq
477 aa
AA seq
DB search
MKNTLLIDSAYINGKFIKSKHTFDVVNPATGKVIASLPDLKVVDCTKAIIDADKAWKSWK
NTTVLERCNIVRKWYDLIQHYKDDLAEIMTLESGKPLSESRVEVDYGSSFVEWFSEEGKR
AYGETIPTHKKGSRMITIRQGVGVVAAITPWNFPLAMITRKVAPALVAGCTVVLKPASQT
PFSAIALAKLAEDAGIPKGVFNVITGKDSVGIGKELATNDLIRKLSFTGSTEVGKTLIEQ
SASNIKKVSMELGGNAPFLVFNDADIAAAVEGAIAGKFRNSGQTCVSINRFLIQEDVYDE
FSMKLSHAVSKLKVGNGLDKGVQVGPLINAKGLEKVQHHVQDALNHGAELATGGKVIKDL
FFQPTVLTNVPKEALIFREETFGPICALFSFKTEEEGIAMANTTEFGLASYFYSTNINRC
FRVAEQLEAGMVGVNTGLISNAAAPFGGVKQSGVGREGSKYGLDEYMELKYICFGGE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacacttttaattgacagtgcctatatcaatgggaaatttatcaagtcaaaa
cacacatttgatgtggtaaatcctgcaacaggaaaagttattgcttcgttgccagattta
aaagtagttgactgtactaaagccataattgatgctgacaaggcatggaaaagctggaaa
aacacaacggtactggaacgttgcaacatcgtccgcaaatggtacgatcttattcaacac
tataaagacgatcttgcggaaatcatgaccctagaaagcggcaaaccgctaagcgaatcg
agggtagaggttgactacggtagttctttcgtagaatggttttcagaagaaggaaaaaga
gcctatggtgaaaccatacctacccataaaaaaggaagtagaatgataacgattaggcaa
ggtgtaggtgtcgtagccgcaattacaccctggaattttcctttagcgatgatcacccga
aaggttgctccagctttggtggctggttgtaccgttgtgctaaaaccggcctcccaaacc
ccattttctgctatagcattggctaaactggctgaagatgcagggattccgaagggtgtt
tttaacgtaattacaggaaaagatagtgttggtatcggcaaagaactagctacaaacgac
ctgataagaaaactatctttcacaggctctaccgaagtcggaaaaacactcatagaacaa
tcagcctctaacattaaaaaagtatctatggagctcggtggtaatgctccctttttggtt
tttaacgatgcggatattgctgctgctgtcgaaggagccattgccggaaaatttagaaac
tcagggcaaacttgcgtttccatcaataggtttttaatccaagaagatgtctatgatgaa
ttttcgatgaaacttagccatgctgtcagtaaattgaaagtaggtaatggacttgacaaa
ggcgtccaggtaggccccttaatcaatgcaaaagggctagagaaagtacagcatcatgta
caagatgcattaaatcatggtgccgaattggctactggaggaaaggttatcaaagatcta
tttttccagccaactgtgctgaccaacgttccgaaagaagcgcttatattccgagaggag
acttttggtccgatttgcgcccttttcagtttcaaaacagaagaagagggaattgcaatg
gccaatacgactgaatttggactagcctcctatttttatagtacaaatataaatcgctgt
tttcgtgttgctgaacagctagaggctggcatggtaggtgtcaatacaggccttatttca
aatgcagcagctccttttggtggagtaaaacaatctggtgtaggtcgtgaaggatctaaa
tacggtttggatgaatatatggaattaaaatatatctgctttggcggtgaataa
DBGET
integrated database retrieval system