Sphingobacterium sp. B29: BV902_25275
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Entry
BV902_25275 CDS
T04670
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sphn
Sphingobacterium sp. B29
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphn02000
]
BV902_25275
Transporters [BR:
sphn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BV902_25275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_6
TPR_4
TPR_14
TPR_2
TPR_19
TPR_12
Motif
Other DBs
NCBI-ProteinID:
APU99979
LinkDB
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Position
5872290..5873912
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AA seq
540 aa
AA seq
DB search
MKKRNTTLYTMLAGLSLLFTGCSKNFLNEDTSSFQSPDNTYINTKGFETGLNGLYSYARM
EFLTWNGSIFSQGATPQEALQVGTDIVAIKTTGTDATLAPFSNYTLNPASSYVRNYWKYA
YGFIGNTNTILEALKKDGISWTDKDNDPKRVEATARFFRAYSYRYLVNLYGDVPWVDKVS
ETPRRDFTRTPKAEILTHMIEDLKYASENLPDNPGTIQEGKLTKWAALHYLAEAYIEAGQ
PDLAAEAANKVIQSGYFKLNDQRFGAEKDKPGDYFHDMFIENNQNRGSGNQETIWAIQLE
YNTQGGGDRYTDWSKRAWVPFYSQQKGFALADSLGGRGLGHVRPYQWWLDSYEKQDVRNS
SFNIKRDWYYNDPSVPELYGKKIELTDAIKESGNVFPTTTKFFYGKTAVDPAFEGNMKDR
VKVRLAETYLLLAEAYWRANKPAQAKDAINAVRARAKASLIDATAINADLILDERARELI
GEEMRRMTLARFGEDIFLRRVQTLNTQSKNVVKKEFILWPIPQEVIDSNTGAAFPQNPGY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagaaatacaactttatatacaatgctagctggcctaagcttactttttaca
ggctgcagcaagaacttcttaaatgaagacaccagcagctttcagtcacctgataatacc
tatattaatacgaaaggcttcgaaactggactaaatggtttatactcttatgcccgcatg
gaattcctgacctggaacggtagtatcttttcccaaggagcaactccacaggaagcgcta
caggtcggaacagatatcgttgctatcaaaaccacaggtacagacgctacattggctcca
ttcagcaattatacgctaaatcctgcttcgtcttatgtccgcaattattggaaatatgcc
tacggatttattggtaataccaataccatccttgaggctttaaaaaaggatggtattagc
tggacagacaaggacaacgatccaaaacgtgtggaagcaacggctcgtttcttccgtgcc
tacagttatcgctacttggtcaacctgtatggcgatgtgccttgggtggacaaagtatcc
gaaacaccccgtcgtgatttcacgcgtacaccgaaagctgaaatcttgacgcacatgatt
gaagaccttaagtatgcaagtgaaaacctgcccgacaatccaggaacaattcaggaaggt
aaattgacgaaatgggctgctttacactacctggcagaagcatatatcgaagctggacag
cctgatttagctgcagaagctgccaacaaagttattcaaagtggctactttaaattgaac
gatcaacgttttggcgccgaaaaagataaacccggggattatttccacgatatgtttatc
gaaaacaatcaaaatcgtggttccggcaatcaagaaacgatctgggccatccaattggaa
tacaatacacaagggggcggcgaccgctacacagattggagtaaacgtgcctgggtacct
ttctattcacaacaaaaaggatttgccttggccgactcacttggtggaagaggtcttggg
catgtacgtccttatcaatggtggctggatagttatgaaaaacaagatgtcagaaactcc
tctttcaatatcaaacgcgattggtattacaacgatccttccgtccctgaactttatggc
aagaagatcgaactgaccgacgccatcaaagaatcaggcaatgtattcccgacaacaacc
aaatttttctacggaaagacagctgttgaccctgcatttgaaggaaatatgaaggaccgt
gtgaaagtacgtttggcagaaacttacctgctattggctgaagcatactggcgcgccaat
aaaccagcacaagctaaagacgccatcaatgctgtccgcgcgcgtgcaaaggcgtcatta
atcgatgccacagcaatcaatgctgatttgattctcgacgaacgcgcccgggagcttatt
ggtgaggaaatgcgccgtatgacccttgcccgttttggtgaggacatctttttacgtcgc
gtgcaaacattaaacacacaatcaaaaaatgtggtgaaaaaagaatttattctttggcct
attccacaagaagttattgacagtaacactggcgcagccttcccgcaaaatccgggatac
taa
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