Sphingobacterium sp. B29: BV902_26405
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Entry
BV902_26405 CDS
T04670
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sphn
Sphingobacterium sp. B29
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphn03400
]
BV902_26405
DNA repair and recombination proteins [BR:
sphn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
BV902_26405
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
ResIII
FtsK_SpoIIIE
AAA
AAA_10
AAA_16
AAA_19
SLFN-g3_helicase
AAA_30
T2SSE
AAA_6
AAA_7
PA26
Motif
Other DBs
NCBI-ProteinID:
APU99417
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Position
complement(6189364..6190905)
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AA seq
513 aa
AA seq
DB search
MANKEQFIEKVQASYNPKGAFIYLGAGMLNGEILAEAKVDLALKMMNRHGLIAGATGTGK
TRTLQLIAEQLSDASVPVFMLDVKGDLSGLAEPGVTNQALIDRGNAVGVPFEPSSFPVEL
YSLSGNKGIPMRITVEDFGPVLLGRILELNETQTGVLAAMFKYAQDHQMPLIDFSDTKKL
LSYLSEGPGSEEIKSDYGKISSASSGTILRKIVALEQQGLAHIFGEKEFDINDLFQKVDG
RGVISLLNISDVQDQPVLYSTFLLSLLAQLFKNMPEVGDLDKPKLVFFFDEAHLLFNGAP
KAFLTQVDQIIRLIRSKGIGVFFCTQSPTDVPESVLAQLGNRVQHALRAFTPNDAENLKK
TVKTYPKSDFYEIDQMLTALGTGQALITVLNDKGIPTEVVATHLVPARAVMGPAADATIN
QIINQSDLKAKYQERQENRSAAEIIDERMQAAEQEQQRAAQEKEAEKASRPSSRRQTPLE
AAQRTATTTLAREGVKLLGKLATGLLNAFLKKK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaagaacaatttattgagaaggtccaggcctcctataatcccaaaggagca
tttatctatctgggagcgggaatgctcaatggtgaaattttggcagaggcaaaagtggat
ttggccttgaaaatgatgaaccgtcacggacttattgccggggcgaccggaaccggtaaa
acgcgtacgctacaattgatcgccgaacagttgtcggatgcctctgtacctgtatttatg
ctggatgtcaaaggcgatttatcgggcttagcagaaccaggtgtcaccaatcaggccctt
attgatcggggaaacgctgtgggcgtgccgtttgagccgtcgtcatttcccgttgaactg
tattcactttctggcaataaggggattcccatgcggattacagtagaagatttcggaccg
gtcttgctgggccggatcctggagctcaatgaaacacaaacaggggtattggccgcaatg
tttaaatatgcgcaagatcatcaaatgccattgatcgatttttcagataccaaaaaactg
ctaagctacctttcagaaggacctggtagcgaagaaatcaaaagcgattatggtaagatt
agttccgccagctcgggaactatcctgcgtaagatcgtcgccttggagcagcaaggtttg
gctcatatctttggcgagaaagagtttgatatcaacgatttgtttcaaaaagtagatggt
aggggggtgattagcctgttgaatatttccgatgtgcaagatcaacccgtactgtattct
acattcttattgagtttattggcacaattgtttaaaaatatgcccgaagttggcgacctg
gataaaccgaagctggtctttttctttgatgaagcccatctgctgttcaacggagctcct
aaagcctttttgacacaggtggatcagattattcgtcttatccgttcgaaggggataggt
gttttcttctgtacacagtctccaaccgatgtaccggagtccgtattggcgcaattggga
aatcgggtgcagcatgcattgcgtgcctttacacccaacgatgctgaaaacttaaagaag
acagtcaaaacgtatccaaaatctgatttttatgaaattgatcagatgttgaccgctttg
gggacgggacaggcattgattaccgtattgaacgacaaaggtattcctacagaggttgtt
gctacgcatttggtaccagcacgtgccgtgatggggcctgcagctgatgcaacaatcaac
cagattatcaatcagtctgatttgaaagctaaataccaggagcgacaagaaaatcgttct
gcagctgaaatcatagatgagcgaatgcaggccgctgagcaggaacaacaacgtgcggcg
caggaaaaagaagcagagaaggcaagtcggccttcttccaggagacagacgcctttggag
gctgcacaacgaactgcgacaacgacgctagcacgggaaggagttaagttgttgggcaaa
ttagcgacgggtttattaaacgcatttttaaaaaagaaataa
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