Sphingopyxis sp. MG: C3E99_02580
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Entry
C3E99_02580 CDS
T05382
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
spho
Sphingopyxis sp. MG
Pathway
spho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C3E99_02580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spho03400
]
C3E99_02580
Enzymes [BR:
spho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3E99_02580
DNA repair and recombination proteins [BR:
spho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C3E99_02580
RecFOR pathway proteins
C3E99_02580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_3
Sigma54_activat
AAA_22
AAA_2
AAA_17
AAA_14
AAA_18
nSTAND3
Rad17
TsaE
RNA_helicase
NTPase_1
AAA_28
AAA_33
NB-ARC
AAA_24
NACHT
IstB_IS21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AVA12880
UniProt:
A0A2L0VLW6
LinkDB
All DBs
Position
complement(563220..564248)
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AA seq
342 aa
AA seq
DB search
MTEPALTTPTRTPEDADAALRPRSLAEFVGQAAARENLRIFIEAAKARSDALDHVLFFGP
PGLGKTTLAQIVARELGVGFRSTSGPVIAKAGDLAALLTNLEDGDVLFIDEIHRLAPAVE
EILYPAMEDRALDIMIGEGPSARSVRIDLPKFTLVGATTRQGLLTTPLRDRFGIPVRLNF
YTHAELEQVIGRAARLLGLGIASDGALEIAKRSRGTPRIAGRLLRRVRDFAAVAGAPTVD
AKVADAALNRLEVDALGLDAMDRRYLTMIADIYRGGPVGADTLAAGLSEPRDTIEDVIEP
YLLQIGLIARTARGRMLNASAWKHLGLNPPAGTQDGLFDQGK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgactgagccggccctcaccacccccacgcgcacccccgaggacgccgacgccgcgctg
cggcccaggtcgctcgccgagttcgtcgggcaggcggcggcgcgcgagaatctgcgcatc
ttcatcgaggcggcgaaggcgcggtcggatgcgctcgaccatgtgctcttcttcgggccg
ccggggctgggcaagacgacgctggcgcagatcgtcgcgcgcgagctcggcgtcggcttc
cgctccacctccggcccggtgatcgcgaaggcgggcgacctcgcggcgctgctcaccaat
ctggaggacggcgacgtcctgttcatcgacgagatccaccggctcgcgcccgcggtcgag
gaaatcctctatccggcgatggaggaccgcgcgctcgacatcatgatcggcgaagggccg
tcggcgcggtcggtacggatcgacctgccgaaattcacgctggtcggcgcgacgacgcgg
cagggcctgctgacgacgccgctgcgcgaccgcttcggcatcccggtgcggctcaatttc
tacacgcatgccgaactcgaacaggtgatcggccgcgccgcacggctgctcggtctcggc
atcgcgtccgacggcgcgctcgagatcgcgaagcgttcgcgcgggacgccgcgcatcgcc
gggcggctgctgcgccgggtgcgcgatttcgccgccgtcgccggtgcgccgacggtcgac
gcgaaggtggcggacgccgcgctcaaccggctggaggtcgatgcgctggggctcgacgca
atggaccgccgctatctgacgatgatcgccgacatctatcgcggcgggccggtgggggcc
gacacgctcgcggcgggcctgtccgagccgcgcgacacgatcgaggacgtcatcgagccc
tatctgctccagatcgggttgatcgcccgcaccgcgcgcggacggatgctcaacgccagc
gcgtggaagcatctggggctcaacccgcccgccgggacgcaggacgggctgttcgaccag
ggaaaatag
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