Sphingopyxis sp. MG: C3E99_03235
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Entry
C3E99_03235 CDS
T05382
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spho
Sphingopyxis sp. MG
Pathway
spho03030
DNA replication
spho03410
Base excision repair
spho03420
Nucleotide excision repair
spho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C3E99_03235
03410 Base excision repair
C3E99_03235
03420 Nucleotide excision repair
C3E99_03235
03440 Homologous recombination
C3E99_03235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spho03032
]
C3E99_03235
03400 DNA repair and recombination proteins [BR:
spho03400
]
C3E99_03235
Enzymes [BR:
spho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C3E99_03235
DNA replication proteins [BR:
spho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C3E99_03235
DNA repair and recombination proteins [BR:
spho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C3E99_03235
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3E99_03235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AVA12990
UniProt:
A0A2L0VM75
LinkDB
All DBs
Position
complement(711010..713817)
Genome browser
AA seq
935 aa
AA seq
DB search
MSEKNHLYLVDGSSYIFRAYHRLPPLTNPRGVPVGAVYGYTTMLWKLAKDLHAADGPTHL
AVILDHSSQSFRNEIYDQYKANRPEPPADLVPQFPLIRDATRAFSLPCIEMEGFEADDLI
ASYTEAAVREGWDVTIVSSDKDLMQLVREGNGAPEVDMLDTMKNVRLGLDAVQEKFGVGP
ELVGDVLALMGDSVDNVPGVRGVGPKTATKLIVEYGDLEAALAGAATMKPSKLRDNLIEH
AEMARLSRILVDLKRDCPLPEPMEDFRLDAIPPEPLKLFLDEHGFRSLSAKLDTGTTPGG
PPTLPRAVDAGAATAAPSTPTLPPMPPIDRSLYETVTTIEALDRWIEAARAAHVVAVDTE
TASLDSVTGTLVGVSLSTGPGKACYIPLGHGGTDMFAEKPEQVPVADALGRLHSLFTDEA
VLKVGHNLKYDIGVLAQHGVRIAPYDDTLVMSFALDAGKHGHGLDELAKLHLDHTCLTFK
EMCGTGKSQISFAEVQLARATEYAAEDAEVAWRLWKLLKLRLPLEGGTRVYEMVDRPLVA
TVEAMERAGIMVDRDYLARLSGEFANAMLRTEGEIHALAGQPFVIGSPKQLGEILFDKLG
LKGGRKGKSGDWSTDQNELERLERDGVPIARKVLEWRQLAKLKSTYTDALQQQINAKTGR
VHTSYSLVGAQTGRLSSTDPNLQNIPIRTEVGRQIRDAFIAAPDHVLMAADYSQIELRLA
AHMADVPELKQAFAQGQDIHAATAIELFGEVNRDTRAKAKTINFAILYGISRWGLAGRLE
ITPDEAQALISRYFERFPGISDYIQATLEGAREHGYTETLFGRKTWFPRIKAANQNERQG
SERAAINAPIQGTSADLIKRAMARMPGALADAGLSDVTMLLQVHDELVFEAPEAKAEAAG
AVIRRVMMGAAEPILKLSVPIDVEIGVGKSWGDAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaagaatcacctctatctggtcgatggctccagctacatctttcgcgcctat
caccgcctgccgccgctgacgaacccccggggcgtgccggtcggcgcggtctatggctac
accaccatgttgtggaagctcgcgaaggatctgcacgccgccgacggcccgacgcacctc
gccgtcatcctcgaccattcgagccagtcgttccgcaacgaaatctatgaccagtacaag
gcgaaccggcccgagccgcccgccgacctggttccgcaattcccgctgatccgcgacgcg
acgcgcgccttctcgctgccgtgcatcgagatggagggtttcgaggccgacgacctgatc
gccagctataccgaggccgcggttcgcgaggggtgggacgtcaccatcgtcagcagcgac
aaggacctgatgcagctcgtccgcgagggcaatggcgcgccggaggtcgacatgctcgac
acgatgaagaacgtccggctcggtctcgacgcggtgcaggaaaaattcggcgtcggtccc
gagctggtcggcgacgtgctggcgctgatgggcgacagcgtcgacaacgtccccggcgtg
cgtggggtcgggcccaagaccgcgaccaagctgatcgtcgaatatggcgacctggaggcg
gcgctggcgggcgccgcgacgatgaagccgtcgaagctgcgcgacaatctgatcgaacat
gcggagatggcgcggctgtcgcgcattctggtcgacctcaagcgcgactgcccgctgccc
gagccgatggaggatttccggctggatgccatcccgcccgagccgttgaagctcttcctc
gacgagcatggcttccgttcgctgtcggcgaagctcgacaccgggacgacgccgggcggt
ccgccgacgctgccgcgcgcggtggatgcgggcgctgccaccgccgcgccttcgaccccg
acgctgccgccgatgccaccgatcgaccgctcgctctacgagacggtgacgacgatcgag
gcgctcgaccgctggatcgaggcggcgcgcgccgcgcatgtcgtcgcggtagataccgag
accgcgagcctcgacagcgtcaccgggacgctcgtcggggtcagcctgtcgaccggtccg
ggcaaggcctgctacatcccgctcggccacggcggcaccgacatgttcgccgaaaaaccc
gaacaggtgccggtcgccgatgcactcggccgcctccattcgctgttcaccgacgaggcg
gtgctcaaggtcggccacaacctcaaatatgacatcggcgtgctcgcgcagcacggcgtg
cgcatcgcgccctatgacgacacgctggtgatgagcttcgcgctcgacgcgggcaagcac
ggccacgggctcgacgaactggccaagctgcacctcgatcacacctgcctgaccttcaag
gagatgtgcggaaccggcaagtcgcagatcagcttcgccgaggtgcagctggcgcgggcg
accgaatatgcggccgaggatgccgaggtcgcgtggcggctgtggaagctgctcaagctg
cgcctgccgctcgaaggcgggacgcgcgtttacgagatggtcgatcgcccgctcgtcgcg
accgtcgaggcgatggagcgcgcggggatcatggtcgaccgcgactatctggcgcggctg
tcgggcgagttcgcgaacgccatgctgcgcacggaaggcgagattcatgcgctcgcgggc
cagccgttcgtgatcggcagccccaagcagctcggcgagatattgttcgacaagctgggc
ctgaagggcgggcgcaagggcaagtcgggcgactggtcgaccgaccagaacgaactggaa
cggctcgagcgcgacggcgtgccgatcgcgcggaaggtcctcgagtggcggcagctcgcc
aagctgaaatccacctataccgacgcgctgcagcaacagatcaacgcgaagaccggccgc
gtccacaccagctacagcctcgtcggcgcgcagaccgggcggctgtcgtcgaccgacccg
aaccttcagaacatcccgatccgtaccgaggtcggtcggcagatccgcgacgccttcatc
gctgcgccggaccatgtcctgatggcggcggactatagccagatcgagctgcggctcgcg
gcgcacatggccgatgtgcccgaactgaaacaggcctttgcgcaggggcaggacattcac
gccgcgaccgcgatcgagctgttcggcgaggtgaaccgcgatacgcgcgccaaggccaag
acgatcaacttcgccatcctctacggcatttcgcgctggggcctcgcgggacggctggaa
atcacgcccgacgaggcacaagccttgatcagccgctatttcgagcgctttcccggcatc
agcgactatatccaggccacgctggagggcgcgcgcgaacatggctataccgagacgctg
ttcggccgcaaaacctggttcccgcgcatcaaggccgcgaaccagaacgagcggcagggc
agcgagcgcgctgcaatcaacgcaccgatccagggcaccagcgccgacctgatcaagcgc
gcgatggcgcgcatgcccggggcgctcgccgatgccggactgtccgacgtgacgatgctg
ttgcaggtccacgacgaactggtcttcgaagcccccgaggccaaggccgaagccgcgggc
gcggtgatccgccgcgtgatgatgggcgctgccgagccgatactgaagctgtcggtcccg
atcgacgtcgagatcggagtcggcaagagctggggcgacgcgcattga
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