Sphingopyxis sp. MG: C3E99_06100
Help
Entry
C3E99_06100 CDS
T05382
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
spho
Sphingopyxis sp. MG
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spho03032
]
C3E99_06100
03036 Chromosome and associated proteins [BR:
spho03036
]
C3E99_06100
03400 DNA repair and recombination proteins [BR:
spho03400
]
C3E99_06100
DNA replication proteins [BR:
spho03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C3E99_06100
Chromosome and associated proteins [BR:
spho03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
C3E99_06100
DNA repair and recombination proteins [BR:
spho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
C3E99_06100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AVA13474
UniProt:
A0A2L0VNI5
LinkDB
All DBs
Position
complement(1333505..1333783)
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELVQKIASENSDLRLEEVERIVDAFFDSIIEQLAAGGRVELRGFGAFSTRARESRT
GRNPRTGTPVAVKAKNVPYFKPGKEMRERLND
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtcagaactggttcagaagatcgcgagcgaaaacagcgatttgcgcctggag
gaggtcgagaggatcgtcgacgccttcttcgattccatcatcgagcagctcgctgcgggc
ggacgggtggaattgcgtggtttcggcgccttttcgacgcgcgcgcgcgaatcgcgaacg
gggcgcaatccccgcaccgggacgccggtcgcggtcaaggcgaagaacgtcccctatttc
aagcccggcaaggaaatgcgcgaacggttgaacgactga
DBGET
integrated database retrieval system
