Sphingopyxis sp. MG: C3E99_06640
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Entry
C3E99_06640 CDS
T05382
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
spho
Sphingopyxis sp. MG
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spho03032
]
C3E99_06640
03036 Chromosome and associated proteins [BR:
spho03036
]
C3E99_06640
03400 DNA repair and recombination proteins [BR:
spho03400
]
C3E99_06640
DNA replication proteins [BR:
spho03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C3E99_06640
Chromosome and associated proteins [BR:
spho03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
C3E99_06640
DNA repair and recombination proteins [BR:
spho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
C3E99_06640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
Peptidase_M35
MSP1_barrel
KORA
Motif
Other DBs
NCBI-ProteinID:
AVA13564
UniProt:
A0A2L0VNS6
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All DBs
Position
1440603..1440875
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AA seq
90 aa
AA seq
DB search
MNKQDLIATVADSSGLTKGDASKAVEAVFDAITASLKKGGEVRLVGFGTFSVSKRKASTG
RNPRTGETMTIAASNQPKFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaagacctgatcgccaccgtcgctgactcgagcggcctgaccaagggcgat
gcgagcaaggcggtcgaggccgttttcgacgcgattaccgcatcgctgaagaagggcggc
gaagtccgtctcgtcggcttcgggacgttctcggtcagcaagcgcaaggcgtcgaccggc
cgcaacccgcgcaccggcgagacgatgaccatcgcggcgtcgaaccagccgaagttcaag
gccggcaaggccctcaaggacgcctgcaactaa
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