Sphingopyxis sp. MG: C3E99_07520
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Entry
C3E99_07520 CDS
T05382
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spho
Sphingopyxis sp. MG
Pathway
spho03420
Nucleotide excision repair
spho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3E99_07520
03430 Mismatch repair
C3E99_07520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spho03400
]
C3E99_07520
Enzymes [BR:
spho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3E99_07520
DNA repair and recombination proteins [BR:
spho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3E99_07520
MMR (mismatch excision repair)
Other MMR factors
C3E99_07520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AVA13706
UniProt:
A0A2L0VP73
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All DBs
Position
complement(1629149..1631461)
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AA seq
770 aa
AA seq
DB search
MNSRPASPPDLPPPHPSDPPYLQGLNGPQRQAVLTTEGPVLMLAGAGTGKTAALTARLAH
IIATRRAWPSEILAVTFTNKAAREMRERIGRMIGDAVEGMPWLGTFHSIAAKMLRRHAEL
VGLQSNFTILDTDDQLRVLKQLIQTEGLDEKRWPARQLAGLIDKWKNRGLTPPDLDAADR
EAYADGKGQHFYALYQARLKTLNACDFGDLLLHMLVILKTHRDVLEQYQQRFKYILVDEY
QDTNASQYLWLRLLAQARKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGATVIRLEQN
YRSTPQILAAASALIAQNSGRLGKTLWTDLDAGDKVRVVGVWDGPEEARRIGEELEDLQR
RGTSLDRAAILVRAQFQTREFEDRFIAIGLPYRIVGGYRFYERAEIRDALAYLRLVQSSA
DDLAFERIVNVPKRGLGDKAVSRIHQFARIERTPLFHAAARITETDELTPQARRQLANFV
AMMRSWQAKANDLPHPELTQLILDESGYTAMLQADRSAEAAGRLENLSELVRAMEEYDSL
EAFLEHVSLVMDRDNDDQTETVTIMTIHAAKGLEFDHVFLAGWEDGVFPSQRAMDEGGTA
SLEEERRLAYVAITRARQRASIYHAANRRIYGQWMSSIPSRFIAEIPPEFVDSKNSFGGG
ASLWRANWSAQGDPFAHVATQSPARTATRGPAWQRALAASSTITRAPAPSEGAPAASVGA
KPRADLAIGMRVFHEKFGYGRIIDVDGNKLEVEFEQAGTKRVLDGFVRAA
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagccgcccagcctccccgcccgatcttcccccgccgcacccatcggacccgccc
tatctgcaggggctgaacggcccgcagcggcaggcggtgctgaccaccgaaggcccggtg
ctgatgctcgcaggggcaggcaccggcaagacggcggcgctgacggcgcggctggcgcac
atcatcgcgacgcggcgcgcgtggccgtccgaaatcctggccgtcaccttcaccaacaag
gcggcgcgcgagatgcgcgagcgcatcggccggatgatcggcgacgcggtcgaggggatg
ccgtggctcggcacctttcacagcatcgcggcgaagatgctgcgccgtcacgccgaactg
gtgggactgcagagcaatttcaccatcctcgacaccgacgaccagcttcgcgttctcaag
cagctcatccagaccgaagggctcgacgagaagcgctggccggcgcgccagctcgcgggg
ctgatcgacaagtggaagaaccgcggcctgaccccgcccgacctcgacgccgcggaccgc
gaagcctatgccgatggcaaggggcagcatttctatgccctttatcaggcgcggctcaag
acgctgaacgcctgcgatttcggcgacctgctgctccacatgctggtgatattgaagacg
caccgcgacgtgctcgaacagtatcagcagcgcttcaaatatatcctcgtcgacgaatat
caggacaccaacgccagccagtatctctggctccgccttctcgcgcaggcgcgcaagaac
atctgctgcgtcggcgacgacgaccagtcgatctattcgtggcgcggcgccgaggtggcg
aacatcctgcgtttcgaaaaggatttccccggcgcgaccgtgatccgcctcgaacagaat
taccgctcgaccccgcagatccttgccgccgcctcggcgctgatcgcccagaattcgggg
cggctcggcaagacgctgtggaccgatctcgacgcgggcgacaaggtccgggtggtcggc
gtctgggacggccccgaggaagcgcggcggatcggcgaggagctcgaagacctccagcgc
cgcggcaccagcctcgaccgcgccgccatcctcgtccgcgcgcagttccagacccgcgag
ttcgaggatcgcttcatcgccatcggcctcccctaccgcatcgtcggcggctaccgcttc
tacgaacgcgcggagattcgcgacgcgctcgcctatctgcgcctcgtccagtcgagcgcc
gacgacctggccttcgaacggatcgtcaacgtgccgaagcgcgggctcggcgacaaggcg
gtgtcgcgcatccaccagttcgcccggatcgagcgcacgccgctgttccatgccgcggcg
cggatcaccgagaccgacgagctgaccccgcaggcgcgccgccagctcgcgaacttcgtc
gcgatgatgcgcagctggcaggcgaaggcgaacgacctgccgcaccccgagctgacccag
ctgatcctcgacgaatcgggctacaccgcgatgcttcaggccgaccgcagcgccgaagcg
gcggggcgcctcgagaacctctccgaactcgtccgcgcgatggaggaatatgattcgctt
gaagccttcctcgagcatgtcagcctcgtcatggaccgcgacaacgacgaccagacggag
accgtcaccatcatgacgatccacgccgcgaaaggcctcgaattcgatcatgtcttcctc
gccggatgggaagacggcgtctttccgtcgcagcgcgcgatggacgagggcggcaccgcg
agcctggaggaggagcgccgcctcgcctatgtcgcgatcacccgcgcccggcagcgcgcg
agcatctatcacgccgccaaccgccgcatctacggccagtggatgagcagcattccgagc
cgcttcatcgcggagattccgcccgagttcgtcgacagcaagaacagcttcggcggcggc
gcgtcgctttggcgcgccaactggtcggcgcaaggcgacccgttcgcgcatgtcgcgacg
cagagcccggcacgcacggcgacccgcggcccggcatggcagcgcgcgctggccgcgtcc
tcgaccatcacccgggcccctgcgccgagcgaaggcgcccccgccgcctcggtcggcgcg
aagccgcgcgccgacctggcgatcggcatgcgcgtgtttcacgagaaattcggttacggt
cggatcatcgacgttgacggcaacaagctggaggtcgaattcgagcaggcgggcaccaag
cgggtcctcgacggcttcgtccgcgccgcctga
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