Sphingopyxis sp. MG: C3E99_07825
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Entry
C3E99_07825 CDS
T05382
Name
(GenBank) DEAD/DEAH box helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
spho
Sphingopyxis sp. MG
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spho03400
]
C3E99_07825
Enzymes [BR:
spho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3E99_07825
DNA repair and recombination proteins [BR:
spho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
C3E99_07825
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AVA13754
LinkDB
All DBs
Position
complement(1695193..1696722)
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AA seq
509 aa
AA seq
DB search
MKFGLPEGHGLPPELLASGLLHRDEFGEYQLTDVQYAALEAGVASGTSILAVAPTSSGKT
DVGLFAAASWLHRGLADGARVAFLTSHRALARQKFEELRRRFAPLFTLAPTEIVLATGDD
VIDGNGDAAVDAFAAPVLIATYEKYLNMLAGSGLHLGAANTCLIADEIQLIGDVTRGQNV
EILMTLLRQSVGQIVGLSAVLERHYATQLSEWLGAELVFETEREIELFYELRTSEATYET
STRSQDGPERLEKRVSGTLEILKELLREGATYEPIAVFCMTKKQVFDLAEAWAVEAGRLG
ATRTEDLPLFREPTTSSEELGRYLPHRFAYHTADLNEDERVAVETRLDSSTLRVVFATTT
LAAGLNYSFRTVIIHSWRRWDSRTRSYVPIQRSEFHNMAGRAGRLSHVDTPGRVIYFAAD
GQEARAAGRYLSWWELDEFAPRIDPVSFSPLALQLFAANVVDTDDSLCAFLQNTFSAERE
LERNPSQPQIWRQAVTQSLSELRNWGFVA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttggattacccgaaggccatggccttccacctgagctactggctagcgggtta
ttgcatcgcgatgagttcggcgaatatcagcttaccgatgttcagtatgcagcgctagag
gcaggtgtcgcaagcggaacgagcattttggcggtggcccccacctccagcgggaaaacc
gacgtggggttgtttgcagccgctagttggcttcatcgcgggctcgcggatggagctagg
gtagcctttctgacgtcccacagagctttggcgcggcaaaagttcgaggaactgcggcgg
cgatttgcgccgctgttcacgttggctccgacggagattgtgctggcaacgggcgatgac
gtcatcgacggaaatggcgatgccgcagtcgatgcgttcgccgcgccagtcctgatcgca
acgtacgaaaagtatcttaatatgctggccgggtcgggtttgcatttaggcgcggccaac
acttgtcttatagccgacgagattcagctcatcggagacgtcacgcgaggccaaaacgtt
gagattttaatgacgctgctgcgacaatctgtcgggcagattgttggactttcggctgtt
ctagagcggcattacgctacgcagttaagcgagtggctaggcgctgagttagtgtttgag
acagagcgtgagatagagttgttttacgaacttcgaacatctgaagcgacctacgaaaca
tcgactcgctctcaagatgggccggaacgcttggaaaagcgcgtttctggcactcttgag
attttaaaggagcttctgcgcgaaggcgcgacatacgagccgattgcagtgttctgcatg
acaaaaaagcaagtttttgatctggccgaagcatgggcggttgaggccggtcgtctcggt
gccacacgaactgaagacctccctctgttccgcgagccgaccacctcttcagaggagctg
ggtcgttatttgccgcaccgctttgcttatcacactgcggacttaaatgaagacgaacgc
gtagccgtcgaaacgcgtcttgatagcagcacgttgcgagtggtttttgctacaactact
ctcgctgctggattgaattattcctttcgtactgtaattattcattcgtggcgccgatgg
gatagccgaacgaggtcctatgtcccaatccagcggtccgaattccataatatggctggt
agggcgggccgactgtcgcatgtggatacgccgggaagagtgatttattttgccgctgat
ggccaggaagctcgcgccgccggtcgatatttatcgtggtgggagttggacgaattcgcc
ccccgcatcgaccctgtcagcttctcaccgcttgccttgcagttgttcgccgcgaacgtg
gtcgatactgacgatagcctctgtgcattcctccaaaatacattcagcgcggaacgcgaa
ctggaacgaaaccctagccaacctcagatttggcgccaagctgttacgcagtcgctctcc
gaattgcgaaattggggcttcgtcgcgtga
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