Sphingopyxis sp. MG: C3E99_07870
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Entry
C3E99_07870 CDS
T05382
Name
(GenBank) DNA-directed DNA polymerase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
spho
Sphingopyxis sp. MG
Pathway
spho03030
DNA replication
spho03430
Mismatch repair
spho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C3E99_07870
03430 Mismatch repair
C3E99_07870
03440 Homologous recombination
C3E99_07870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spho03032
]
C3E99_07870
03400 DNA repair and recombination proteins [BR:
spho03400
]
C3E99_07870
Enzymes [BR:
spho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C3E99_07870
DNA replication proteins [BR:
spho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C3E99_07870
DNA repair and recombination proteins [BR:
spho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C3E99_07870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_22
Mg_chelatase
APP1_cat
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AVA13760
LinkDB
All DBs
Position
1703667..1704635
Genome browser
AA seq
322 aa
AA seq
DB search
MIGHQEAEKAIIDAWSAGCLHHAWLLAGPQGIGKAAFASRVARFLVTHDAGGEGGAIALD
DPGDGAAGRLVEAGNHPEIVRLERQPKEKGKDLARNITIDQVRTMIRRLYLSLSLGHWRV
VIIDAVDDLETDGANALLKTLEEPPARTVFLLVSHSPGRLLPTIRSRCRTLRFQPLDPDV
MTAWLHELRPMLDRAEARAIVAASGGVPGKALALIDSDVAAMEKKLLAIAAGGDPDNRLR
EALAREVGGASNRARLELVIDIVPGLLARLARERPVSEIAPVLAGWDRVQRTVRDAVRGS
YDGAMVGFEIGNCLAELAPREG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggcatcaggaggccgagaaggccatcatcgacgcgtggagcgccgggtgcctg
catcatgcgtggctgctcgccgggccgcagggcatcggcaaggcggccttcgcgtcgcgc
gtcgcgcgcttccttgtcacccacgatgccggtggagagggcggggcgatcgcgctcgac
gaccccggcgacggcgcggcggggcggctggtcgaggcgggcaatcaccccgagatcgtc
cggctggaacgccagcccaaggaaaagggcaaggacctcgcgcgcaacatcaccatcgac
caggtgcgcacgatgatccggcgtctgtatctgtcgctgtcgctcggccactggcgcgtg
gtgatcatcgacgcggtcgacgacctcgagactgacggcgccaatgcgctgctcaagacg
ctggaagagccgccggcgcggacggtgttcctgctggtcagtcattcgccggggcgcttg
ctgccgacgatccggtcgcggtgccggaccctgcgttttcaaccgcttgaccctgacgtc
atgacggcgtggctgcacgaattgcgcccgatgctcgaccgcgcagaggcgcgcgcgatc
gtcgcggcgtcgggcggggtgccgggcaaggcgctggcgttgatcgacagcgacgtcgcc
gcaatggagaagaaactgctcgcgatcgcagcgggcggcgatcccgacaaccggctgcgc
gaggcgctggcgcgcgaggtcgggggggcgagcaatcgggcgcggctggaactggtgatc
gacatcgtaccgggtctgctcgcgcggctcgcccgcgaacgcccggtgagcgagatcgcg
ccggtgctcgccggttgggaccgcgtgcagcgcaccgtccgcgacgcggtgcgcggatcc
tacgacggggcgatggtcgggttcgagatcggcaattgcctggcggaactggcgccgcgc
gaggggtga
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