Sphingopyxis sp. MG: C3E99_08810
Help
Entry
C3E99_08810 CDS
T05382
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
spho
Sphingopyxis sp. MG
Pathway
spho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C3E99_08810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spho03021
]
C3E99_08810
03400 DNA repair and recombination proteins [BR:
spho03400
]
C3E99_08810
Enzymes [BR:
spho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C3E99_08810
Transcription machinery [BR:
spho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C3E99_08810
DNA repair and recombination proteins [BR:
spho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C3E99_08810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AVA13925
UniProt:
A0A2L0VPX0
LinkDB
All DBs
Position
complement(1886827..1887171)
Genome browser
AA seq
114 aa
AA seq
DB search
MARVTVEDCVDKVPNRFDLVLLSAHRAREISGGSELTIDRDRDKNPVVALREIAEQTVRP
VDLKDSLVGTLQKVVVDDDDTPDEISSIARSAEALRLTAAAPPRSPAGGGGDFE
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgttaccgtcgaggattgcgtcgacaaagttcccaaccgtttcgatctggtc
ctgctgtccgcgcaccgcgcgcgcgagatttcgggcggttcggaactgacgatcgatcgc
gaccgcgacaagaatcccgtcgtcgcgctgcgcgagatcgccgagcagaccgtgcgtccc
gtcgacctcaaggactcgctcgtcggcacgttgcagaaagtggtcgtcgatgatgacgat
acgcccgacgaaatcagctcgatcgcgcgctcagccgaagcgctgcgcctgacggccgcc
gcgccgccgcgcagccccgctggcggcggcggcgacttcgaataa
DBGET
integrated database retrieval system
