Sphingopyxis sp. MG: C3E99_10160
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Entry
C3E99_10160 CDS
T05382
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
spho
Sphingopyxis sp. MG
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spho03021
]
C3E99_10160 (rpoH)
Transcription machinery [BR:
spho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C3E99_10160 (rpoH)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
AVA14154
UniProt:
A0A2L0VQG0
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Position
2214122..2215024
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AA seq
300 aa
AA seq
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MANKSKLPAVVPALGGEASLNRYLAEIRKFPLLTPEQEYMLAKRFQEHDDNEAAAQLVTS
HLRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFDPDRGFRLATYAMWWIRASIQEF
ILRSWSLVKMGTTAAQKKLFFNLRRMKNNLEAFEDGDLSPEHVAKIATDLGVTEDEVVSM
NRRMAMGGDTSLNVPMGEDGDSQWQDLLGDEGPLQDERVAEAEERDVRHALLSEALETLN
DRERHILTERRLTDDPKTLEDLSQVYDVSRERVRQIEVRAFEKLQKAMLKLAGERRLIAT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataaaagcaaacttccggctgtggtgcccgcgctcggcggtgaggcgagcctg
aaccgctatctggccgaaatccgcaaattccccctgttgacgcccgagcaggaatatatg
ctcgcgaagcggttccaggaacatgacgataacgaggccgcggcgcagctcgtgacttcg
cacctgcgcctcgtcgccaagatcgcgatgggctatcgcggctatggcctgccggtcagc
gagctgatcagcgagggcaatatcggcctgatgcagggggtgaagaaattcgaccccgac
cgcggcttccgcctcgccacctatgcgatgtggtggattcgcgcctcgatccaggaattc
atcctgcggtcgtggagcctcgtgaagatgggcaccactgcggcgcagaagaagctgttc
ttcaaccttcgccggatgaagaacaacctcgaggcgttcgaggacggcgacctgagcccc
gaacatgtcgcgaagatcgcgaccgaccttggcgtcaccgaggacgaggtggtcagcatg
aaccgccgcatggcgatgggcggcgacacgtcgctcaacgtcccgatgggcgaggacggt
gacagccagtggcaggatctgctcggcgacgaaggcccgctgcaggacgagcgcgtcgcc
gaggcggaggaacgcgacgtgcgccacgcgctgctcagcgaagcgctcgaaacgctgaac
gaccgcgaacgccacatcctgaccgaacgccgcctgaccgacgaccccaagacgctcgag
gacctgagccaggtctacgacgtcagccgcgagcgcgtccgccagatcgaggtgcgcgcg
ttcgaaaagctgcagaaggcgatgctgaagctcgccggcgaacggcggctgatcgcgacc
tga
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