Sphingopyxis sp. MG: C3E99_11710
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Entry
C3E99_11710 CDS
T05382
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spho
Sphingopyxis sp. MG
Pathway
spho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C3E99_11710 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spho03019
]
C3E99_11710 (pnp)
03016 Transfer RNA biogenesis [BR:
spho03016
]
C3E99_11710 (pnp)
Enzymes [BR:
spho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C3E99_11710 (pnp)
Messenger RNA biogenesis [BR:
spho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C3E99_11710 (pnp)
Transfer RNA biogenesis [BR:
spho03016
]
Prokaryotic type
tRNA degradation factors
C3E99_11710 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
BioW
Motif
Other DBs
NCBI-ProteinID:
AVA14428
LinkDB
All DBs
Position
complement(2531201..2533516)
Genome browser
AA seq
771 aa
AA seq
DB search
MFDVKKVSIEWGGETLTLETGKVARQADGAVVASLGETVVLCAVTAAKSVKDGQDFFPLT
VHYQEKFSSAGRIPGGFFKRERGATEKETLVSRLIDRPIRPLFPEGFYNEINAIAQVLSY
DGHNEPDILAMVAASAALTISGVPFMGPIGAARVGYLNGEYILNPTDEQVAEGDLDLVVA
ATHDAVMMVESEANELSEEVMLGAVMFAHDACREVVKAIIKLAEQAAKDPWEMASSDDNA
ALKDKIKKLVGKDIAAAYKLTDKSARSNALNEARAKAKEMFVAEGLDPQAVMAGIKLTKK
LEAEIVRTAILKEGKRIDGRTTTQIRPIEAETHFLPRAHGSALFTRGETQTIATCTLGTK
EAEQMIDGLNGLSYQNFMLHYNFPPYSVGEVGRFGAPGRREIGHGKLAWRALHPVLPSKE
DFPYTIRLTSDITESNGSSSMATVCGGSLSLMDAGVPIKRPVSGIAMGLILEGKDFAILS
DILGDEDHLGDMDFKVAGTSEGITTMQMDIKIAGITQEIFEKALAQAKEGRAHILGEMNK
ALGETRSELSAHAPRIETITIDKSKIRDVIGTGGKVIREIVATTGAKVDIDDEGIIKIAS
SDTAQIEAAKAWILGIVEEPEVGKIYNGKVVNLVDFGAFVNFMGGKDGLVHVSEIRNERV
EKVSDVLSEGQEVKVKVLEIDPRGKVRLSMRVVDQESGEELEDTRPAREPRGDRGDRGPR
GDRGRDGDRGRGGRDRGPRRDGEGRGDRGPRRERSDDGPEDQGHVPDFLKD
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgtgaaaaaagtatcgatcgagtggggcggtgaaacgctgacgctcgaaacg
ggcaaggttgcccgccaggccgatggcgccgtcgtggcgagccttggcgagacggtcgtg
ctctgcgccgtcaccgccgccaagtcagtgaaggacgggcaggatttcttcccgctgact
gtccactatcaggaaaaattttcgtcggcggggcgcatccccggcggcttcttcaagcgc
gagcgcggcgcgaccgaaaaggaaacgctggtcagccgcctgatcgaccgtccgatccgc
ccgctgttccccgaaggtttctataacgagatcaacgccatcgctcaggtgctgagctat
gacggccacaacgagcccgacatcctcgcgatggtcgccgcctcggccgcgctcaccatt
tcgggcgtgcccttcatggggccgatcggcgccgcgcgcgtcggctatctgaacggcgaa
tatattctcaacccgaccgacgagcaggttgccgagggcgacctcgacctcgtcgtcgcc
gcgacgcacgacgcggtgatgatggtcgaatccgaagccaacgagctgtcggaagaggtg
atgctgggcgccgtgatgttcgcgcacgatgcgtgccgcgaggtcgtcaaggcgatcatc
aagctcgccgagcaggccgccaaggatccgtgggaaatggcgtcgtcggacgacaatgcc
gcgctcaaggacaagatcaagaagctggtcggcaaggatatcgccgccgcctacaagttg
accgacaagtcggcccgctcgaacgcgctcaacgaagcgcgcgcgaaggcgaaggagatg
ttcgtcgccgaggggctggacccgcaggcggtgatggccggcatcaagctgaccaagaag
ctggaagcggagatcgtccgcaccgccatcctcaaggaaggcaagcgcatcgacggccgc
acgacgacgcagattcgcccgatcgaggcggaaacgcatttcctgccgcgcgcgcacggt
tcggcgctgttcacccgcggcgagacgcagacgatcgcgacctgcaccctgggcaccaag
gaagccgagcagatgatcgacgggctcaacggcctgtcgtatcagaatttcatgctccac
tataacttcccgccctattcggtcggcgaagtcggccgcttcggggcgccgggccgtcgc
gagatcggccacggcaagctcgcatggcgcgcgctgcacccggtgctgccctcgaaggag
gatttcccctacacgatccgcctgaccagcgacatcaccgaatcgaacggctcgtcgtcg
atggcgacggtgtgcggcggttcgctgtcgctgatggacgctggcgtgccgatcaagcgc
ccggtcagcggcatcgcgatgggcctgatcctcgaaggcaaggatttcgcgatcctttcc
gacatcctcggcgacgaggatcatctcggcgacatggatttcaaggtggcgggcacgtcc
gaaggcatcaccacgatgcagatggacatcaagatcgccggcatcacgcaggaaatcttt
gaaaaggcgctggcgcaggccaaggaaggccgtgcgcatatcctgggcgagatgaacaag
gcgctcggcgaaacccgcagcgagctgtcggcgcatgcgccgcgcatcgagacgatcacg
atcgacaagtcgaagattcgcgacgtcatcggcaccggcggcaaggtgatccgcgaaatc
gtcgcgaccaccggcgccaaggtcgacatcgacgacgagggcattatcaagatcgcctcg
tccgacaccgcgcagatcgaggccgccaaggcctggatcctcggcatcgtcgaggagccc
gaagtcggcaagatctataacggcaaggtcgtcaacctcgtcgatttcggtgccttcgtg
aacttcatgggcggcaaggacggtctcgtccacgtctcggagatccggaacgaacgcgtc
gagaaggtctccgacgtcctgtctgaagggcaggaggtcaaggtcaaggtgctggagatc
gacccgcgcggcaaggtgcgcctgtcgatgcgcgtcgtcgatcaggaaagcggcgaggaa
ctcgaagatacccgcccggcgcgcgaaccgcgcggcgaccgcggcgatcgcggtcccaga
ggagaccggggccgtgacggcgaccggggtcggggcggccgcgatcgcggtccgcgccgc
gacggtgaaggccggggcgaccgcggcccgcgccgcgagcgctcggacgacggtccggaa
gaccagggccatgtgcccgacttcctgaaggactga
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