Sphingopyxis sp. MG: C3E99_11720
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Entry
C3E99_11720 CDS
T05382
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spho
Sphingopyxis sp. MG
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spho03016
]
C3E99_11720 (truB)
Enzymes [BR:
spho01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C3E99_11720 (truB)
Transfer RNA biogenesis [BR:
spho03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C3E99_11720 (truB)
Prokaryotic type
C3E99_11720 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AVA14430
LinkDB
All DBs
Position
complement(2534003..2534959)
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AA seq
318 aa
AA seq
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MNGWIILDKSIGLGSTQAVAAVKRVCRERGLGKVKVGHGGTLDPLASGVLPIALGEATKL
CGRMLDASKVYDFTIAFGTETAGLDAEGEVVATSDVRPALADIEAVLPRFTGPIEQVPPA
FSAIKVEGQRAYDLARKGAAVDMKARAVIIYNLRNAGLDPASVRSVREEWPPDQVRGDEM
GEGLNSITLSAHVSKGTYIRSLARDIARAAGTVGHVAMLRRTRAGPFTLAQAISLDKLNA
FGQGAAQSDVILPLEAGLVDIPALDLSPEAAGAIRQGRVWTGESAHDGLYWGRDSEKRPV
ALIEALAGRLKVVRGFNL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaacggctggatcatcctcgacaagtccatcggcctcggctcgacccaggcggtcgcc
gcggtcaagcgcgtgtgccgcgaacgcgggctcggcaaggtcaaggtggggcatggcggg
acgctcgacccgctggcgtccggggtgttgccgatcgcgctcggggaggcgaccaagctg
tgcgggcggatgctcgacgcgagcaaggtctatgatttcaccatcgcgttcggaaccgag
accgcgggcctcgatgccgagggcgaggtcgtcgcgacgagcgacgtccggccagcgctg
gcggacatcgaagcggtgctgccgcgcttcaccgggccgatcgagcaggtgccgccggcc
ttttcggcgatcaaggtggaagggcagcgcgcctatgacctggcccgcaagggcgcggcg
gtcgacatgaaggcgcgcgcggtgatcatctacaacctgcgtaatgccggacttgatccg
gcatccgttcgttcggtgcgagaggaatggcccccggatcaagtccggggtgacgagatg
ggggaggggttgaactccatcactctcagcgcgcatgtgtcgaagggcacctatatccgc
agcctcgcgcgcgacatcgcccgcgcggccggcaccgtcgggcatgtcgccatgctgcgc
cgtacccgggcggggccgttcacgctggcgcaggcgatttcgctggacaaattgaacgct
ttcggtcaaggcgccgcgcaatcagatgtgattctgccgctcgaggcagggctggtcgac
atcccggctctggacctctccccggaagcggcaggggcgatccgccagggtcgtgtctgg
accggggaaagcgcgcacgacgggctctattggggacgggacagcgagaagcggcccgtc
gcgttgatagaggctttggccggaaggctgaaggtcgtgcggggcttcaatctgtaa
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