Sphingopyxis sp. MG: C3E99_12115
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Entry
C3E99_12115 CDS
T05382
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
spho
Sphingopyxis sp. MG
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spho03400
]
C3E99_12115 (addA)
Enzymes [BR:
spho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3E99_12115 (addA)
DNA repair and recombination proteins [BR:
spho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C3E99_12115 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AVA14495
LinkDB
All DBs
Position
complement(2620145..2623603)
Genome browser
AA seq
1152 aa
AA seq
DB search
MAKPAGLATLDPRQGAAADPAHHVWLGASAGTGKTQVLSARVLRLMLGGVSPEAILCITF
TKAGAAEMAHRIHERLAAWVRMDEGDLRLDLHALGLDWQRPGLMTRARSLFATVIDSPGG
AIRVQTIHSFCQTLLASFPLEARLLPGFRAIEEDEAGALQREVLSDLLSAQGGEDGADLS
DAAAMLSRRLGPESALSFLSSCAAAFGGPRALLPPSARDLRDAFDLPVGDPDAWLTDQLA
AGAIADADIRAVATSGAAWGTRTGEACSDKMVGWLMADPGARAAMLDDLIGCFLTGKGDL
RADFAGDKGRMTDCVDSAVRIVEAAAGLRGTATAMRVADELAAAWKLGSRFAEGYALAKR
TRGLADFDDLITLAGSLLRVSSFGEWVRFKLDQRTDHILVDEAQDTNMRQWGIVLSLAEE
FFAVHRDDMERARTLFTVGDRKQAIFGFQGTEPKAFATARDLFHALGDRAGQAFRQVDLV
SNYRSTPAVLEVVDTWLAAGGTAAMGLDGDEPPHRPFRSNQAGQVELWAPLPVGKALDTE
ADGAGEAGDEGAGGDSGAPASDPASMRLARAIADEVRDWIANGKDGRPVAPGDVMILVRR
RRDLAARIVARLQALHVPVAGVDRFALTQPLAVQDLMAAMRFAVQPLDDLNLAALLVSPL
IGWTQDELYARTRGRGRAAIWEHLRRTEGDLPAATMEALRHLLAMADYTTPFRFLETLLS
GPIDGRRRLYARLGREARDPIDELLSQALAFEARETVSLLGFLASVEGSAAEIKRQTEAR
SDVVRVMTVHGSKGLQAPIVILADATDDAGIGHRPFTVDVAAWEKLPVFALPGDERHGAL
ADAYEAAARAATEEHWRLFYVAMTRAEEILVVAGVTKTPDRSVPAASWHAAAQGALEAMG
CDWEEAGPQWGRRRVHRVHAGRWARREREAKAAPPPFVLPAWAHRPAPEEARPPRPLAPS
ALGEDEVATPPQGGARAAAVERGLLLHALFERLPSVASDRRRAAALRWLAAQAPALFERD
RAAMADEVLAVLGDPAHAALFGPGSLAEVPLSAVVDGTVVAGIVDRLLVTDARILVIDYK
TGRRVPESAADVAPAYLRQMAAYREALRVIFPGRAVDAALLYTAGPTLIGLDAAVLAPHK
PGLAATKANLPD
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcccgctggcctcgcgacgctcgatccgcggcagggcgccgccgccgatccc
gcgcaccatgtctggctcggcgcgtcggcgggcaccggcaagacgcaggtgctttcggcg
cgcgtgctgcggctgatgctgggcggcgtatcgcccgaagcgatcctgtgcatcaccttc
accaaggcgggcgcggccgagatggcgcaccgcatccacgaacgcctcgcggcgtgggtg
cggatggacgagggcgacctgcggctcgacctgcacgcgctggggctcgactggcagcgg
ccggggctgatgacgcgcgcgcggtcgctgttcgcgacggtgatcgacagccccggcggc
gcgatccgcgtccagacgatccacagtttctgccagacgctgctcgccagctttccgctg
gaggcgcggctgctccccggtttccgcgccatcgaggaggatgaggccggagccctgcag
cgcgaggtgctgagcgacctgctgagcgcgcaaggcggggaagatggcgctgacctcagc
gacgcggcggcgatgctgtcgcggcggctcggtcccgaatcggcgctgtcgttcctgtcg
agctgcgcggcggcgttcggcgggccgcgcgcgctgctgccgccgtcggcgcgcgacctg
cgcgacgctttcgacctgccggtgggcgaccccgatgcgtggctcaccgatcaactggcg
gcgggggcgatcgccgatgccgacatccgcgcggtggcgacgagcggcgcggcgtggggt
acccgaaccggagaggcctgttcggacaagatggtcggctggctgatggccgatcccggc
gcgcgcgcggcgatgctcgacgacctcatcggctgcttcctgaccggcaagggcgatctg
cgcgcggatttcgcgggcgataagggccggatgaccgattgcgtcgattcggcggtgcgg
atcgtcgaggcggcggcaggtctgcggggcaccgcgaccgcgatgcgcgtcgccgacgag
ctggcggcggcatggaagctcgggagccggtttgccgagggctatgcgctggcgaagcgg
acacgcgggctcgccgatttcgacgacctcatcaccctcgcgggcagcctgctgcgcgtc
agcagcttcggcgaatgggtgcgcttcaagctcgaccagcgcaccgaccatatcctcgtc
gacgaggcgcaggacaccaacatgcgccagtggggcatcgtcctgtcgctcgccgaggag
tttttcgcggtccatcgcgacgatatggaacgcgcgcgcaccctgttcaccgtcggcgac
cgcaagcaggcgatcttcggctttcagggcaccgaaccgaaagccttcgcgaccgcgcgc
gacctgttccatgcgctgggcgatcgggcggggcaggcgttccgccaggtcgatctcgtc
tccaactatcgctcgaccccggcggtgctcgaagtcgtcgatacgtggctcgcggcgggc
ggcaccgcggcgatggggctggacggcgacgaaccgccgcaccgccccttccgttcgaac
caggcggggcaggtcgagctttgggcaccgctgccggtaggcaaggcgctcgatacggaa
gccgacggtgcgggcgaggcgggcgacgaaggcgccgggggcgatagtggcgcgcccgcc
tccgaccccgcgagcatgcggctcgcgcgcgcgatcgccgacgaggttcgcgactggatc
gcgaacggcaaggatggccgcccggtcgcgcccggcgacgtgatgatcctcgtccgccgc
cgccgcgacctcgcggcgcggatcgtcgcgcgcctgcaggcgctgcacgtcccggtcgcg
ggcgtcgaccgcttcgcgctgacccagccgcttgcggtgcaggacctgatggcggcgatg
cgctttgcggtgcagccgctcgatgacctcaacctcgcggcgctgcttgtctcgccgctg
atcggctggacgcaggacgagctttatgcgcgcacccgcggacgcgggcgcgccgcgatc
tgggagcatctgcgcaggaccgagggcgacctgcccgccgcgacgatggaggcgctgcgc
cacctgctggcgatggccgattacaccacgcccttccgcttcctcgaaaccttgctgtcg
gggcccatcgacgggcggcgcagactctatgcgcggctggggcgcgaggcgcgcgacccg
atcgacgaactgctgagccaggcgctcgccttcgaggcgcgcgagacggtgtcgctgctc
ggctttctcgccagcgtcgagggcagcgccgccgagatcaagcgccagaccgaggcgcgc
agcgacgtggtgcgcgtgatgacggtgcacgggtcgaaggggttgcaggcgccgatcgtc
atcctggccgacgcgaccgacgacgctgggatcgggcaccggcccttcaccgtcgacgtc
gcggcgtgggagaaactgcccgtcttcgcgctgcccggcgacgaacgccacggcgcgctc
gccgacgcctatgaggcagcggcgcgcgcggcgaccgaggagcattggcggcttttctat
gtcgcgatgacgcgggccgaggagatactggtcgtcgcgggggtgacgaaaacgcccgac
cggtcggtccccgcggcgagctggcacgccgcggcgcagggcgcgctcgaggcgatgggc
tgcgattgggaagaggcggggccacagtggggccgccgccgggtccaccgcgtccacgcc
ggccgatgggcgcgccgcgagcgcgaggcgaaggccgcgccgccgccgttcgtattgccc
gcctgggcgcaccggccggcgccggaagaggcgcggccgccgcggccgctcgctccgtcg
gcgctcggcgaggacgaagtggcgacgccgccgcaaggcggtgcgcgcgccgcggcggtc
gagcgcgggctgctgctccacgcgctgttcgagcgcctgccgtcggtcgcgtccgaccgc
cgccgcgccgccgcgctacgctggctcgcggcgcaggcgccggcgctgttcgagcgcgat
cgcgcggcgatggcggacgaggtgctcgcggtgctgggcgatccggcgcacgcggcgctg
ttcggccccggcagcctcgcggaggtgccgctgtcggcggtggtcgacggcacggtggtg
gcggggatcgtcgaccggctgctcgtcaccgacgcgcgcatcctcgtcatcgactacaag
accgggcggcgagtgcccgaaagcgcggcagacgtcgcgcccgcctatctgcgccagatg
gccgcctatcgcgaagcgctgagggtgatcttcccggggcgggcggtggacgcggcgctg
ctttataccgcggggccgacgctgatcgggctcgacgctgcggtgctggcgccgcacaag
ccgggcttggcggcaaccaaggcgaatttgccggattga
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