Sphingopyxis sp. MG: C3E99_12470
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Entry
C3E99_12470 CDS
T05382
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spho
Sphingopyxis sp. MG
Pathway
spho00300
Lysine biosynthesis
spho00470
D-Amino acid metabolism
spho01100
Metabolic pathways
spho01110
Biosynthesis of secondary metabolites
spho01120
Microbial metabolism in diverse environments
spho01230
Biosynthesis of amino acids
Module
spho_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C3E99_12470 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C3E99_12470 (lysA)
Enzymes [BR:
spho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C3E99_12470 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AVA14556
UniProt:
A0A2L0VRL2
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Position
complement(2705505..2706764)
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AA seq
419 aa
AA seq
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MDHFQYRDGVLHAEDIPLPRIAEEIGTPVYVYSRATLERHAQVFRDALKDVPKKHIAFAI
KCNPNLGVLRVLARQGYGADVVSGGELERAIAAGMAAEDIVFSGVGKTRAELALGLDRGI
GQFNIEHEAEGVALAQIALAKEMTARAVLRVNPDVDAGTHAKISTGKAENKFGVGIDVAP
EIFGRLAGLPGLQMRGIALHIGSQLTSLDPLEAAFERAGRLVADLRAAGHSITHVDLGGG
LGVPYRPDDNPPSPAEYGAMVARVTKDWDVTLLFEPGRVIAGNTGVLLTEVLWVKPGATN
PFVIVDAAMNDLARPALYDAYHDFVAVKPTGDKMTASIVGPVCETGDTFARDRLVDAVEA
GDLAVFRTAGAYGATMASTYNSRSLVPEVLVDGDRYIVVADRIAAGTIMAAERVPDWID
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaccattttcaatatcgtgacggcgtcctccacgccgaggacattcccctgccgcgc
atcgccgaggagatcggcacccccgtctatgtctattcgcgcgcgacgctcgagcgccat
gcgcaggtgttccgcgacgcgttgaaggacgtgccgaagaagcacatcgccttcgcgatc
aagtgcaaccccaacctcggcgtgctgcgcgtcctcgcgcggcagggctatggcgccgac
gtcgtgtcgggcggcgagctcgaacgcgcgatcgccgcgggcatggcggcggaggacatc
gtcttttcgggcgtcggcaagacgcgcgccgagctggcgctcgggctcgaccgcgggatc
ggccagttcaacatcgagcatgaagccgaaggcgtcgcgctggcccagatcgcgctggcg
aaggaaatgaccgcgcgcgcggtgctgcgcgtcaaccccgacgtcgacgccggcacccac
gccaagatttcgaccggcaaggccgagaacaagttcggcgtcggcatcgacgtcgcgccg
gagatattcggccgactcgcgggccttccggggcttcagatgcgcggtatcgcgctccac
atcggcagccagctcaccagcctcgacccgctcgaagcggcgttcgagcgcgccggccgc
cttgttgccgacctgcgcgcggcggggcacagcatcacccacgtcgacctcggcggcggt
ctcggcgtgccctatcgccccgacgacaatccgccgagcccggccgaatatggcgcgatg
gtcgcgcgcgtaaccaaggactgggacgtcaccctgctgttcgagcccggccgcgtgatt
gcgggcaacaccggcgtgctgctgaccgaggtgctgtgggtcaagcccggcgcgaccaat
cccttcgtgatcgtcgatgccgcgatgaacgaccttgcacgcccggcgctctacgatgcg
tatcatgatttcgtcgcggtgaagccgaccggggacaagatgaccgcgtcgatcgtcggc
ccggtgtgcgagaccggcgacaccttcgcgcgcgaccggttggtcgacgcggtggaggcg
ggcgacctcgccgtcttccgcaccgccggcgcctatggcgcgacgatggcctcgacctac
aacagccgcagcctcgtgcccgaggtgctggtggacggcgaccgctacatcgtcgtcgcc
gaccgcatcgccgcagggacgatcatggccgccgagcgcgtgccggactggatcgactga
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