Sphingopyxis sp. MG: C3E99_16950
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Entry
C3E99_16950 CDS
T05382
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
spho
Sphingopyxis sp. MG
Pathway
spho02020
Two-component system
spho02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C3E99_16950
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C3E99_16950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spho03000
]
C3E99_16950
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spho02035
]
C3E99_16950
Transcription factors [BR:
spho03000
]
Prokaryotic type
Helix-turn-helix
Other families
C3E99_16950
Bacterial motility proteins [BR:
spho02035
]
Flagellar system
Flagellar assembly proteins
Others
C3E99_16950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
IstB_IS21
Mg_chelatase
AAA
AAA_2
AAA_33
MCM
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AVA15315
UniProt:
A0A2L0VTU9
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All DBs
Position
complement(3704233..3705297)
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AA seq
354 aa
AA seq
DB search
MTEGGHNKAAAALEASIIGSSPAICQLRDMIRRVARSNASVMLCGPSGSGKELVARAIHD
EGVRAGKAFAAINCGAIPSDLIESELFGHEKGSFTGAHARRIGHFEASDGGTLFLDEIGD
MRFDMQVKLLRVLEERTIVRVGSSEMRRVDVRVISATHQDLGAAIAEGKFREDLFFRLGV
IVLQVPSLASRVEDIPALIRHFQRKMPADAKCRYDDAALAVLLHHDWPGNVRELRNFVER
ASVLHGGETLGADDVARLLNPTAAPAPRPAVPSSLAAVQASADDAAFHAAHPKTPAPGRP
IDLKREIETIELEQIHVALDLADGIISEAARLLTLKRTTLIEKMRKYGVHQQAA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagggtgggcacaacaaggcagcggcggcgctggaggcatcgatcatcggcagc
agtccggcgatctgtcagcttcgcgacatgatccggcgcgtcgcgcggtcgaacgcctcg
gtgatgctgtgcggcccgtcgggatcgggcaaggaactcgtcgcccgcgcgatccacgac
gaaggcgtccgcgccggcaaggcctttgccgcgatcaattgcggcgccattccctccgac
ctcatcgaatccgaactgttcgggcatgaaaagggcagcttcaccggcgcccacgcccgc
cgcatcggccatttcgaggcgagcgacggcggtacgctgttcctcgacgaaatcggcgac
atgcgcttcgacatgcaggtgaaactgctccgcgtgctcgaggagcggacgatcgtccgc
gtcggcagcagcgagatgcgccgcgtcgacgtccgcgtcatttcggcgacgcaccaggat
ctgggcgccgcgatcgccgagggcaaattccgcgaggacctgttcttccgcctcggcgtc
atcgtgctccaggtccccagcctcgcgagccgggtcgaggatattccggcgctgatccgt
catttccagcgcaagatgcccgccgacgccaaatgccgttacgacgatgccgcgctggcg
gtgctgctgcaccacgactggccgggcaacgtccgcgagctgcgcaatttcgtcgagcgc
gccagcgtgctgcacggcggcgagacgctcggcgccgacgatgtcgcgcgccttctgaac
cccaccgcagcgcctgcgccgcggccggctgtccccagcagcctcgccgcggtgcaggcc
agcgcggacgacgccgccttccacgccgcgcatcccaagacgccggcgccggggcgtccg
atcgacctcaagcgcgagatcgagacgatcgaactcgaacagatccacgtcgcgctcgac
ctggccgacggcatcatttcggaggccgcgcgcctgctgacgctcaagcgcacgacgctg
atcgagaagatgcgcaaatatggcgtccaccaacaggcggcgtga
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