Sphingopyxis sp. MG: C3E99_17855
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Entry
C3E99_17855 CDS
T05382
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spho
Sphingopyxis sp. MG
Pathway
spho03030
DNA replication
spho03430
Mismatch repair
spho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C3E99_17855
03430 Mismatch repair
C3E99_17855
03440 Homologous recombination
C3E99_17855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spho03032
]
C3E99_17855
03400 DNA repair and recombination proteins [BR:
spho03400
]
C3E99_17855
Enzymes [BR:
spho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C3E99_17855
DNA replication proteins [BR:
spho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C3E99_17855
DNA repair and recombination proteins [BR:
spho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C3E99_17855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DUF3131
Motif
Other DBs
NCBI-ProteinID:
AVA16101
LinkDB
All DBs
Position
3887829..3888521
Genome browser
AA seq
230 aa
AA seq
DB search
MREIIFDTETTGLDPRSGHRLVEIGCIELVDRRESGRTFHAYFHPERDMPPEAEAVHGLS
IQFLSDKPLFAARADELLEFLGDAPMIAHNAVFDFGFINAELERAGRPALDLARMCCTVQ
MARKLHPGAKHSLDALCTRYGIDRSHRIKHGALLDAELLAHLYIEMTGGRQIGLGLGAES
AAMAAGLSMRPAAPSRPFREPRAHAATAAELARHAEFVAALNQPLWHDSP
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagataatcttcgatacggaaaccacggggctcgaccccagatcgggacatcgg
ctggtcgagatcggatgcatcgagctggtcgatcgccgcgagtcgggccgaaccttccac
gcctatttccatcccgaacgcgacatgccgcccgaggccgaggcggtgcacggcctgtcg
atccagttcctttccgacaagccgctgttcgccgctcgcgccgacgagctgctcgaattc
ctgggcgacgcgccgatgatcgcgcacaacgccgtcttcgacttcggcttcatcaacgcc
gaactcgaacgcgccgggcgcccggcgctcgacctcgcccgcatgtgctgcacggtgcag
atggcgcgcaagctgcatccgggcgccaagcacagcctcgacgcgctctgcacccgctac
ggcatcgaccgcagccaccgcatcaagcacggcgcgctgctcgacgccgagctgctcgcc
catctttatatcgagatgaccggcggccggcagatcgggcttggtctgggcgccgagtcc
gccgcgatggcggcgggcctgtcgatgcgacccgccgcgccgtcccgcccgtttcgcgag
ccgcgcgcgcacgccgccaccgcggccgagctggcgcgccatgccgaattcgttgccgca
ctcaatcaacctttgtggcacgatagcccgtga
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