KEGG   Sphingopyxis sp. MG: C3E99_18455
Entry
C3E99_18455       CDS       T05382                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
spho  Sphingopyxis sp. MG
Brite
KEGG Orthology (KO) [BR:spho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spho03400]
    C3E99_18455
Enzymes [BR:spho01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C3E99_18455
    5.6.2.6  RNA 3'-5' helicase
     C3E99_18455
DNA repair and recombination proteins [BR:spho03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    C3E99_18455
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AVA15575
UniProt: A0A2L0VUK4
LinkDB
Position
complement(4002337..4004742)
AA seq 801 aa
MALPPLFADWFAARGWRLRGHQAAMLAAAERGEHALLVAATGAGKTLAGFLPSLTDLAGR
PSDRLHTLYVSPLKALAADVERNLLGPIAAMGLDISVESRSGDTSSDRKARQRAKPPNIL
LTTPESLSLLLSWPDSFAMFADLKTVVIDEIHAFAPGKRGDLLSLAMARLQRIAPGLRRV
GLSATIADPDAYRAWLAPDADAGGVTLVEGEPGADPDIRILLPEGAVPWAGHSGRYAVHQ
VMAEIAKNRTTIIFCNTRGLAELIFQELWKVNDLSLPIAIHHGSLDREARQRAETAMAEG
RLRALVATASLDLGLDWGDVDCVIQMGAPKGSSRLLQRIGRANHRLDEPSRALIVPGNRF
EYLEARAALDAVAAGERDADRFRPGALDVLAQHVMALACAAPFDEAELLAEIRTATPYRW
VDAGLFARLLGFVRDGGYALKSYDRFRRLAPDGPGRWRVAHPRLAAQHRLNAGIIVEAPM
AAVRFRNGRRLGQVEEYFASTLTPGDTFAFAGLSLEVEAIRDTDLIVRATTRPARIPSYM
GARLAISTRLADRVRAFLADPASWRRFPEDVRFWLEMQALRSVLPRPGELLVESFPHEGA
HYLVCYPFEGWNAHQSLGMLLSKRMERAGLQPLGFVASDYAIALWSLRPVTDPEALFDAT
ILEGEFVEWVETSHLLKRAFREVAVIGGLIERQHPGKRKTGKQVTFSTDLIFDVLRKYEP
DHLLLEAAWADARERLTDVARLGDLLDRAAGTMVHQRLDRISPLAIPVLVLIGRENVAAA
DLDDALLGELADTLAEAAMGP
NT seq 2406 nt   +upstreamnt  +downstreamnt
atggccctgccacccctcttcgccgactggtttgccgcgcgcggatggcggctgcgcgga
catcaggccgccatgctcgcggcggcggagcgcggcgagcatgcgctgctcgtcgcggcg
accggcgcgggcaaaacgctcgcgggcttcctgcccagcctgaccgaccttgcgggtcgt
cccagcgaccggctgcacacgctgtacgtctcgccgctcaaggcgctcgccgccgatgtc
gagcgcaacctgctcggcccgatcgccgccatgggcctcgacatcagcgtcgagagccgc
agcggcgacaccagttcggacaggaaggcgcggcagcgcgcaaagccgccgaacatattg
ctgacgacgcccgaatcgctgtcgctattgctctcctggcccgacagcttcgcgatgttc
gccgatctgaagacggtggtgatcgacgagatacatgcctttgcgcccggcaagcgcggc
gacctcctgtcgctcgcgatggcgcggcttcagcggatcgcgcccggtctgcgccgcgtc
ggcctgtcggccaccatcgccgaccccgacgcctatcgcgcctggctggcgcccgacgcc
gatgccgggggggtaacgctggtcgagggcgagcccggggccgatcccgacatccgcatc
ctgctgcccgaaggcgcggtgccgtgggccggccattcggggcgctatgcggtgcatcag
gtgatggcggagatcgcgaagaaccgcacgacgatcatcttctgcaacacgcgcgggctc
gccgagctgatctttcaggagctgtggaaggtcaacgacctgtcgctgccgatcgcgatc
caccacggcagcctcgaccgcgaggcgcggcagcgcgccgagacggcgatggccgagggg
cggctgcgcgcgctcgtcgcgaccgccagcctcgacctcgggctcgactggggcgacgtc
gactgcgtgatccagatgggcgcgcccaagggctcgtcgcggctgctccagcgcatcggc
cgcgccaaccaccggctggatgagccgagccgcgcgctgatcgtgcccggcaaccgcttc
gaatatctggaggcacgcgccgcgctcgatgcggtcgcggcgggcgagcgcgatgccgac
cgcttccgtcccggcgcgcttgacgtgctcgcgcagcatgtgatggcgctcgcctgcgcg
gcgccgttcgacgaggccgaactgcttgccgagattcgcaccgcgacgccctatcgctgg
gtcgatgccgggcttttcgcgcgcctgctcggcttcgtgcgcgacggcggctatgcgctc
aagagctatgaccggttccgccgcctcgcacccgacggaccggggcgctggcgggtcgcg
cacccccggctcgcggcgcagcatcggctcaacgccgggatcatcgtcgaggcgccgatg
gcggcggtgcggttccggaacgggcggcggctggggcaggtcgaggaatatttcgccagc
acgctgacaccgggcgacaccttcgccttcgccgggctcagcctcgaggtcgaggcgatc
cgcgacaccgacctgatcgtccgcgcgacgacgcgtcccgcgcgcatccccagctatatg
ggcgcgcggctcgccatctcgacccgcctcgccgaccgggtgcgggctttcctcgccgat
ccggcaagctggcgacgctttcccgaggatgtccgcttctggttggagatgcaggcgctg
cggtcggtgctgccgcgtcccggcgaactgctcgtcgagagttttccgcacgaaggcgcg
cattatctcgtctgctatccgttcgaggggtggaacgcgcaccagtcgctggggatgctg
ctgtcgaagcggatggagcgcgcggggctgcagccgctcggcttcgtcgcctccgactat
gcgatcgcgctctggtcgctacggccggtcaccgatcccgaggcattgttcgacgcgacg
atcctcgaaggcgaattcgtcgagtgggtcgagacatcgcacctgctgaaacgcgccttc
cgcgaggtcgcggtgatcggcggcctcatcgagcgccagcatccgggcaagcgcaagacg
ggcaagcaggtgaccttttcgaccgacctgatcttcgacgtgctccgcaagtacgagccc
gaccatctgctgctcgaggccgcctgggccgatgcgcgcgagcggctgaccgacgtcgcg
cggctcggcgacctgctcgaccgcgcggccggaacgatggtgcaccagcggctcgaccgc
atcagcccgctcgcaatccccgtcctcgtcctgatcggccgcgagaatgtcgccgccgcc
gatctcgacgatgcgctgctcggcgaactcgccgacacgctcgccgaagcggcgatgggg
ccctag

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