Sphingopyxis sp. 113P3: LH20_02095
Help
Entry
LH20_02095 CDS
T04069
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphp03032
]
LH20_02095
03400 DNA repair and recombination proteins [BR:
sphp03400
]
LH20_02095
Enzymes [BR:
sphp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LH20_02095
DNA replication proteins [BR:
sphp03032
]
Prokaryotic type
DNA Topoisomerases
LH20_02095
DNA repair and recombination proteins [BR:
sphp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LH20_02095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ALC10735
UniProt:
A0A0M4CVM8
LinkDB
All DBs
Position
complement(461363..462370)
Genome browser
AA seq
335 aa
AA seq
DB search
MPTRLIHVDDSLPGISRERWRGGWRYRDAKGRPIRDKDEIARLDAIALPPAYEDAWFCPA
SNGHILATGYDARGRKQYRYHPDFRMAQEADKYDRCAAFGHALPLLRARLADDLVRRTLG
PERVVAAVVRLLDLAALRVGNEQYVAANKSFGATTLRRQHARLRGERLHLRYRAKGSTMR
EVTVTDRSLATLVRRLQDLPGQHLFQYEDGGSLCAVGSDEVNAYIREAMGADFSAKHFRT
WSASVTAFTYLYDAAEPPTLKALLAHVAQGLGNTPAVARRAYVHPAMIAAAQARENFAIA
AGSLPRATRYLSRYERGFLAYLEQTPGAAALLRSA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgcgcctgatccacgtcgatgacagcttgcccggcatcagccgcgagcgctgg
cgcggcggctggcgttaccgcgatgccaaaggaaggccgatccgcgacaaggatgagatt
gcccgcctcgatgcgatcgccctgccccccgcctatgaggatgcctggttctgccccgct
tccaacgggcatatcctcgcgaccggctatgatgcacgcgggcgcaagcaatatcgctat
catcccgacttccggatggcgcaggaggccgacaaatatgatcgctgcgccgcattcggc
catgcgctcccgctgcttcgcgcgcgcctcgccgacgacctcgtacgtcggacgctgggg
cccgagcgcgtcgtagcggctgtggtgcgtctccttgaccttgcagcgctacgtgtcggg
aatgaacaatatgtcgcggccaacaagagttttggtgcaacgacgctgcgccggcagcac
gcgcgcctccgcggcgagaggctgcacttgaggtaccgcgccaagggcagcacgatgcgt
gaggtgacggtcaccgaccgcagcctcgcgacgctggtgcgccgtctccaggacctgccg
gggcaacatctgtttcagtatgaggatggaggcagcctctgcgccgtgggatcggacgag
gtcaacgcctatatccgcgaggcgatgggggcagatttcagtgccaagcatttccgtacc
tggtcggcgagcgttaccgccttcacttatctttatgatgcggcggagccgccgacgctg
aaggcgctgctcgcccatgttgcgcaggggctcggcaacacaccggcggtggcccggcgc
gcctatgttcatcctgcaatgatcgcagcagcgcaggcgcgcgaaaattttgcaatcgcg
gcgggatcgcttccgcgcgcgacccgatatctttcacgttacgaacgcgggtttttggcc
tatctggagcagacgccgggcgccgccgccctgctccgctccgcctga
DBGET
integrated database retrieval system
