Sphingopyxis sp. 113P3: LH20_02150
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Entry
LH20_02150 CDS
T04069
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp00061
Fatty acid biosynthesis
sphp00071
Fatty acid degradation
sphp01100
Metabolic pathways
sphp01212
Fatty acid metabolism
sphp02024
Quorum sensing
sphp04146
Peroxisome
Module
sphp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LH20_02150
00071 Fatty acid degradation
LH20_02150
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LH20_02150
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH20_02150
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphp01004
]
LH20_02150
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphp04147
]
LH20_02150
Enzymes [BR:
sphp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LH20_02150
Lipid biosynthesis proteins [BR:
sphp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LH20_02150
Exosome [BR:
sphp04147
]
Exosomal proteins
Exosomal proteins of breast milk
LH20_02150
Exosomal proteins of breast cancer cells
LH20_02150
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ALC10746
UniProt:
A0A0M4CRW9
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All DBs
Position
complement(469854..471521)
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AA seq
555 aa
AA seq
DB search
MSSPFSWSSNYRHPTAWDQDFPPLSLPDMLAASAARNGSAPALDFMGRQFSYAEIARGAA
RVAKGLQQRGIGKGSRVGLYLPNVPHYVAAYYGALAAGATVVNFSPLYTVAELEAQVEDS
GTEILFTISAAALLPTALAVLDGSSLKQLVVGSVAGGLPAAKSMLYRLLRRREVAALPDD
PRVIRFSALTDNDGGPGPVVINPEHDVALIQYTGGTTGTPKGAKLTHQNLTANARQVNAI
DPDHDAGDRILGVLPFFHVFANTCVLNRTILNGGMITMLPRFDAKQTLEAITRTKATALP
GVPTMYQALLDHPDLPRTDFSSLRICISGGAPMPAELREKFVAATGASLVEGYGLTESSG
VVATNPYDGPVKAGTIGQPIPATRIRLLDREDPSKDAPAGQEGELAVKGPQIMQGYWNRP
EADGDSFTADGWLRTGDVATIDAEGYIRIVDRLKDMISVGGFKVYPSVIEAHLHQHPAVK
EAIVLGVPDAYRGESPKAFVTLEEGFDVAGEALAAWLNARLGKHERVSAVDVREELPKTM
IGKLDRKALRAEMKE
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccttttcctggtcgagcaactatcgtcatccgacggcatgggaccaggat
tttccgccgctctcgcttcccgacatgctggcagcgagcgccgcgcgcaatggatccgcg
ccggcgctcgacttcatgggccggcagttcagctatgccgagatcgcacgcggcgcggcg
cgcgtcgcaaaggggctccaacagcgcggtatcgggaagggaagccgcgtgggcctctac
cttcccaatgtcccgcattatgtcgcggcctattatggcgcgctcgccgcgggggctacc
gtggtcaatttctcgccgctttacactgtcgccgagctggaagcccaggtcgaggactcg
gggaccgagatactcttcacgattagcgccgccgcgctccttccgactgcgctcgctgtg
ctcgacgggtcgagcctgaagcaactcgtcgtcggttcggtggcgggagggttgcccgca
gccaaatccatgctctaccgcctgctccgtcgccgcgaggtcgcagccctgcccgacgac
cctcgcgtcattcgattctcggcgctcaccgacaatgacggtggacccggccctgtcgtg
atcaaccccgagcatgacgtggcgctgatccagtataccggaggcaccaccggcacgccg
aagggcgcaaagctcacccatcagaatttgaccgccaatgcgcggcaggtgaacgcgatc
gaccccgaccatgacgcaggagaccgcatccttggcgtcctgcccttcttccacgtcttt
gcgaacacctgcgtcctcaaccgcacgatcctgaacggcggcatgattacgatgctgccg
cgcttcgacgcaaagcagacgctggaggcgatcactcgcacgaaggcgaccgccctgccc
ggcgtgccaacgatgtatcaggcgctgcttgaccatcctgaccttcccaggaccgatttt
tccagcctgcgcatctgtatctcggggggcgcgccgatgcccgctgagctgcgcgagaaa
ttcgtcgccgccacgggcgcctcccttgtcgagggctatggtcttacggaaagctccggc
gtcgttgcgacaaacccctatgatggcccagtcaaggcggggacgatcggtcagccgatc
ccggcaacccgaattcgtctgctcgacagggaggatccgtcaaaggatgcgcccgcgggg
caggagggcgaactcgcggtgaaggggccccagatcatgcagggctattggaaccggccc
gaggcggacggcgacagctttaccgccgacggctggctgcgcaccggcgacgtcgcgacg
atcgacgccgagggctatattcgcatcgtcgaccggctgaaggacatgatctcggtcggg
ggcttcaaggtctatccaagcgtaatcgaggcgcatcttcatcagcaccccgcggtcaag
gaggcgatcgttcttggtgtccccgatgcctaccgcggcgagagccccaaagcctttgtg
accttggaagagggattcgacgtggcgggcgaggcgctcgcggcctggctcaatgcccgg
ctcggcaagcacgagcgggtgagcgcagtcgatgttcgcgaggaactacccaagacgatg
atcggcaagctcgaccgcaaggcgctccgcgctgaaatgaaggagtga
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