Sphingopyxis sp. 113P3: LH20_02780
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Entry
LH20_02780 CDS
T04069
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp03030
DNA replication
sphp03430
Mismatch repair
sphp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH20_02780
03430 Mismatch repair
LH20_02780
03440 Homologous recombination
LH20_02780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphp03032
]
LH20_02780
03400 DNA repair and recombination proteins [BR:
sphp03400
]
LH20_02780
Enzymes [BR:
sphp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH20_02780
DNA replication proteins [BR:
sphp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LH20_02780
DNA repair and recombination proteins [BR:
sphp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LH20_02780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ALC10871
LinkDB
All DBs
Position
593228..594343
Genome browser
AA seq
371 aa
AA seq
DB search
MKATIERAVLLKSLGHVQSVVERRNTIPILSNVLIEADASGQLKLMATDLDLQVVETVAA
KVETPGTTTVSAHTLFEIARKLPEGAEVSLSAAEGKMQVKAGRSNFNLPTLPRDDFPVIA
EGDLPTSFELPVAELIQIIDKTRFAISTEETRYYLNGIFLHVAEDATGPVLKAAATDGHR
LARYTVTRPEGATGMPDVIVPRKCVGEIRKLLDEAEGNVEISLSASKIRFQLGNAVLTSK
LIDGTFPDYSRVIPTANDKLLKVDPKSLFQGVDRVSTIASEKTRAVKVGLDKDRITLSVT
SPENGTAAEELAAGYDSDAMEIGFNARYLSDILGQVDGDSVELHLADANAPTLIRESEKS
PALYVLMPMRV
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgacgatcgaacgcgcagtgctcctgaaaagcctcggccacgtccagtcggtg
gtggaacggcgcaataccattcccattctgtcgaacgtgctgatcgaggccgatgcctcg
ggccagctgaagctgatggcgaccgaccttgatctgcaggtcgtggagactgtcgcagcg
aaggtcgagacgccgggtactaccactgtgtcggcgcacacgctgttcgagattgcccgc
aagctccccgagggcgccgaggtcagcctgtcggcggccgagggcaagatgcaggtcaag
gcaggccgttcgaatttcaacctgccgacgctcccgcgcgacgattttcccgtgatcgcc
gagggcgacctgccgacgagtttcgagctgccggtggcggagcttatccagattatcgac
aaaacgcgcttcgccatctcgaccgaggaaacgcgctactatctgaacgggattttcctg
cacgtcgcggaggatgcaacggggccggtgctgaaggcggccgcgaccgatggccatcgc
cttgcgcgctatacggttacgcgtcccgaaggggcgacaggcatgcccgacgtgattgtg
ccgcgcaaatgtgtgggcgaaatccgcaagctgctcgatgaggccgagggcaatgtcgag
atcagcctgtcggcgtcgaagatccgcttccagctcggcaacgcggtgctgacctccaag
ctgatcgatggcacctttcctgattatagccgcgtgatcccgaccgcgaacgacaagctg
ctgaaggtggatcccaagagtctcttccagggcgtcgatcgtgtctcgacgatcgcgagt
gagaagacgcgcgcggtaaaggtcgggctcgacaaggatcgcatcacgctcagcgtcacc
agccccgagaacggcacagcggccgaggaactggcagcgggctatgacagcgatgcgatg
gagatcggcttcaacgcccgctacctgtccgacattctgggtcaggtcgacggtgacagt
gtcgagctgcatctcgccgatgccaacgcgccgacgctgatccgcgagagcgagaaaagc
ccggcgctctacgtgctgatgccgatgcgggtttga
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