Sphingopyxis sp. 113P3: LH20_02840
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Entry
LH20_02840 CDS
T04069
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphp03009
]
LH20_02840
Enzymes [BR:
sphp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LH20_02840
Ribosome biogenesis [BR:
sphp03009
]
Prokaryotic type
ribosomal protein modification factors
LH20_02840
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ALC10883
UniProt:
A0A0M3QCH7
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Position
complement(605718..607088)
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AA seq
456 aa
AA seq
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MTTKTLPAQPKVGMVSLGCPKALVDSERILTKLRSDGYGLSPDYAGADVVLVNTCGFLDS
AKEESLEAIGEAMAENGRVIVTGCMGNEAEAIRARFPKVLAVTGAHQYEQVVDAVHEAAP
PTQGPFVDLVPEGGLKLTPRHYSYLKISEGCNHSCAFCIIPDLRGKLVSRRVDAVLREAE
KLVAAGTRELLVISQDTSAYGVDLKHESRQWHGAEVRAHMTDLARHLGELRTSEGRAPWV
RLHYVYPYPHVEAVIPLMAEGLLTPYLDIPFQHASPRVLKAMKRPANEAKVLERLKSWRA
IAPDLAIRSSFVVGFPGETEEDFQYLLDWLDEAQLDRVGAFRFEPVAGAQANALPDPVPE
AVKEERYQRIMEKTAAISAAKLQAKIGRTLPVIIDEVGEADEDGSIGATGRSQADAPEID
GHVYLRDVAETLKAGDIVDVEIEDADEHDLFGVIAA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaagactcttcccgcccagccgaaagtcggcatggtgtcgctcggctgcccg
aaggcgctggtcgacagcgaacgcattttgaccaagctgcgctccgatggttacggcctt
tcgcccgactatgccggcgccgacgtcgtgctggtcaatacctgcggcttcctcgattcg
gcgaaggaagaaagcctcgaggcgatcggcgaggcgatggcagagaatggccgcgtcatc
gttaccggctgcatgggcaatgaggccgaggcgatccgtgcgcgcttcccgaaggtgctc
gcggtcaccggcgcgcatcaatatgagcaggtcgttgatgcagttcacgaagccgcgccg
ccgacgcagggccccttcgtcgatctggtgcccgagggcggacttaagctcacgccccgg
cattacagctatctgaaaatcagcgagggctgcaaccacagctgcgccttctgcatcatc
cccgatcttcgtggaaagctggtgtcgcgccgcgtcgatgcggtgctgcgcgaggctgaa
aagcttgtggcggccggaacgcgcgaactcttggtcatcagccaggacacctcggcttat
ggcgtcgacttaaagcacgaaagccgccagtggcacggcgccgaggttcgcgcccacatg
accgatcttgcgcggcaccttggagagctccggacgtcggaaggccgtgccccttgggtt
cgcctccactatgtctacccctacccccacgtcgaagcagtgatcccgctgatggccgag
ggcctgctcaccccctacctcgatatcccgttccagcacgcgagcccccgggtgctgaag
gcaatgaagcgccctgccaatgaagccaaggtgcttgaacggttgaaaagctggcgcgcc
atcgcccccgacctcgcgatccgctcgagcttcgtcgtgggcttccccggagagaccgag
gaggatttccaatatcttctcgattggctcgacgaagcgcagctcgaccgagtcggcgcc
ttccgcttcgagccggtcgcgggcgcacaggcgaacgccctgcccgacccggtacctgag
gcggtcaaggaagagcgctatcagcgcatcatggaaaagaccgccgcgatcagcgccgcc
aagctccaggccaagatcggccggaccctgcccgtgatcatcgacgaggtaggcgaggct
gacgaagatggcagtatcggcgccaccggccgcagccaggccgatgcgccggagatcgac
ggccatgtctaccttcgcgacgttgcagagacgctgaaggccggcgatatcgtcgacgtc
gagatcgaggacgccgatgagcatgatctgttcggggtgatcgcggcgtaa
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