Sphingopyxis sp. 113P3: LH20_02865
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Entry
LH20_02865 CDS
T04069
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LH20_02865
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphp01007
]
LH20_02865
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphp03016
]
LH20_02865
Enzymes [BR:
sphp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
LH20_02865
Amino acid related enzymes [BR:
sphp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LH20_02865
Transfer RNA biogenesis [BR:
sphp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LH20_02865
Prokaryotic type
LH20_02865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Snf7
TMF_TATA_bd
DUF4407
DUF1690
GreA_GreB_N
Motif
Other DBs
NCBI-ProteinID:
ALC10888
UniProt:
A0A0M4CTB1
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All DBs
Position
complement(610816..612090)
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AA seq
424 aa
AA seq
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MHDIRLIRENPEAFDAGLARRGLGPLSTEILAADASLRALQTEMQAALARRNEASKAIGQ
AMAKGDKKSAEALKAEVAALKQRLPEQEAAEREQLAALQDSLAALPNLPAPDVPQGEDEE
SNVEISRWGTPRSFDFQPREHADFAPALGLDFETAAKMSGARFAFLKGPMARLERALGQF
MLDKQTNEAGYSECATPLLVRDDAAFGTAQLPKFREDLFQTTNGMWLISTSEMSLTNAVR
EEILAETDLPIRMTGLTPCFRSEAGAAGRDTRGYIRQHQFWKVELVSIVRPEDSDAELER
KTRAAEAILEALELPYRKMLLCAGDMGFAARKTYDLEVWLPGQNSYREISSCSNCGDFQA
RRMNARFRREGAKGTEFVHTLNGSGLAVGRTLVAILENYQQADGSVDIPEALLPYMGGIT
RLTP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatatccgcctgatccgggaaaaccccgaagcgttcgacgccggcctcgcccgc
cgcgggctcggccctttgtctaccgaaattctggccgccgatgcctcgctccgcgcgctg
cagaccgaaatgcaggccgcgcttgcacggcgcaatgaagcatcaaaggcgattggtcag
gcgatggcgaagggcgacaagaagagcgccgaggcgctgaaggccgaagtcgcagccctc
aaacagcggcttcctgaacaggaagccgccgagcgcgagcagctcgccgcgctgcaggat
agcctggccgcgctccccaacctgcctgcgcccgacgtgccccaaggggaggatgaggaa
agcaatgtcgagatttcgcgctggggcacaccgcggagcttcgactttcagcccagggaa
catgccgattttgcccccgcgctcgggctcgacttcgaaaccgctgcaaaaatgtcggga
gcccgcttcgcctttctcaaaggtccgatggcaaggctcgaacgcgcgctcggccagttc
atgctcgacaagcagaccaacgaggcaggctacagcgagtgcgcgaccccgcttctcgtc
cgcgacgacgcagcgttcgggactgcgcagctccccaagttccgcgaggacctgttccag
accaccaatggaatgtggctgatctcgacctccgagatgagtctcaccaatgcggtgcgc
gaggaaatattggcggaaaccgatttgccgattcgcatgaccggcctcaccccctgcttc
cggtcggaggccggggccgcaggccgcgacacgcggggctatatccgccagcatcagttc
tggaaggtcgaactggtctccatcgtccgccccgaggacagcgacgccgaacttgagcgc
aagacccgggcggccgaggcgatccttgaggcgctcgaacttccctatcgcaagatgctg
ctttgcgcgggcgacatgggctttgctgcgcgcaagacctacgatcttgaagtgtggctg
ccgggacagaacagctaccgcgagatttcaagctgctcgaactgcggcgattttcaagcg
cggcgcatgaacgctcgcttccgccgcgagggcgccaagggcaccgagttcgtccatacg
ctcaatggctcgggactcgccgttgggcgcaccctcgtcgcgatcctcgaaaactaccag
caagccgacggcagcgtcgacattcccgaggcgcttctcccctatatgggcgggattacg
cggctgacgccctga
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