Sphingopyxis sp. 113P3: LH20_03480
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Entry
LH20_03480 CDS
T04069
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphp03016
]
LH20_03480
Enzymes [BR:
sphp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LH20_03480
Transfer RNA biogenesis [BR:
sphp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LH20_03480
Prokaryotic type
LH20_03480
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ALC11007
UniProt:
A0A0M4D7K9
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All DBs
Position
739886..740788
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AA seq
300 aa
AA seq
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MNGWIILDKPVGLGSTQAVGAVKRVCREAGLGKVKVGHGGTLDPLASGVLPIALGEATKL
TGRMLDASKVYDFTVAFGTETAGLDAEGEVVAVSEVRPTLCEIAAVLPRFTGDIEQVPPA
FSAIKVDGERAYDRARKGERFEMKARGVTIYSLHVEDKGAGEGERLEALTFTAHVSKGTY
IRSLARDIAHAVGSVGHVTMLRRTKAGPFTLDDAISLDKLNAFGQGAAQSEIILPLEAGL
VDIPALDLSPEAAGAIRQGRVWTGVSTHDGLYWGRDGECRPIALIEVSAGTLKVVRGFNL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaacggctggatcattctcgataaaccggtggggcttggctcgacgcaggcggtgggc
gccgtcaagcgcgtgtgccgcgaggccgggctcggcaaggtcaaggtcggccatggcggc
acgctcgatcccttggcatccggggtcttgccgattgcgctcggcgaagcgaccaagctc
accgggcggatgctcgatgcgagcaaggtttatgacttcaccgtggcttttggcaccgag
actgcggggctcgacgccgagggcgaagtggtcgcggtgagcgaggtgcgacccacactt
tgcgagatcgccgcggtgctgccgcgcttcaccggcgacatcgaacaggtgccccccgcc
ttttcggccatcaaggtcgatggcgaacgcgcgtacgaccgcgcgcgcaagggcgagcgg
ttcgagatgaaggcgcggggcgtgacgatctacagtcttcatgtcgaggataagggagca
ggcgaaggcgagagactggaggcgctgaccttcacggcccatgtctcgaagggcacctat
attcgcagtctcgcccgcgatattgcgcatgccgtcggcagcgtcggtcatgtcaccatg
ctccgccgcaccaaagcgggacctttcacgctggatgacgcgatttcgctggacaaattg
aacgctttcggccaaggggccgcgcaatcagagattattctgccgctcgaggcagggctg
gtcgacatcccggctctggacctttccccggaagcggcaggggcgatccgacagggtcgc
gtctggaccggggtaagcacgcacgacgggctctactgggggcgggacggcgaatgtcgc
ccgattgccctgatagaagtttcggcgggaacgctgaaagtcgtgcggggcttcaatctt
taa
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