Sphingopyxis sp. 113P3: LH20_03540
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Entry
LH20_03540 CDS
T04069
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphp02000
]
LH20_03540
Transporters [BR:
sphp02000
]
Other transporters
Pores ion channels [TC:
1
]
LH20_03540
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ALC11019
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Position
752420..754417
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AA seq
665 aa
AA seq
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MQSPVTRAAPWLALAMAALPAVASAATAEADQTIIVTARTDTDAAEDRAAKTPGGTDVVR
HEDYADKSIVSLRDTLAYSPGVYLQPRFGQEVRISIRGSGLSRGYHMRGLTLLQDGAPIN
LADDNGDFQELEPIFFDHLEVYRGANALRFGSSTLGGAINGVTPTGRTAEGIYLRGDIGS
FDNLRGLVSAGVAADRVDVWGAVSVDSSDGDRDHARRRSLRFHGNAGLALTDSITTRLYA
SYNNIDQQLPGALTREEALTTPRKANAASVAGDQARDIESLRIQSRTRVDLGSTRLDVGV
FVNAKTLHHPIYQLVDQKSLDRGGFFRLDHASGAIEATLGGELRAGNVHSRRFVNLAGRR
GARTFDAEQFARTATLYGELRLKPAAGLSLIAGGVYADGVRRQRETFSNGPAVNRARADF
DAFSPKFGVLLDAMPGVQIYGNYSRSVEFPGFIELAQLAAFVPLAPQRAWTAEIGTRGTR
GLLSWDLSLYRADIKGELLQYTPSADIPASTFNAANTRHEGIEAALEISPTDWLRLRQVY
TYSDFRFRGDAVYGDNRLPVVPRHVYRAELRLGGDALHVAPAIEWVAEGPFVDYRNRTRT
PGYALLGFTAGMRVADGIDAFLDARNLTARKAIGDISAAIDVTAASAIYYPVERRAVSAG
LRARF
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccctgttactcgcgcggcgccctggttggcgctcgccatggccgctcttccc
gcggtcgcctccgctgcaacggcggaggccgaccagaccatcatcgtgaccgcccgcacc
gacaccgacgctgctgaagatcgggcggcgaaaacccccggcgggaccgacgtggttcgc
cacgaagattatgccgacaagtcgattgtcagcctgcgcgatacgctggcctattcgccc
ggcgtctatctccagccgcgctttgggcaggaggtgcgaatctcgatccgcggctcgggt
ctgtcacgcggatatcacatgcgcgggctgacgctgctccaggacggagccccgatcaac
cttgccgacgacaatggtgattttcaggagctcgaaccgatcttcttcgatcatctcgag
gtgtaccgcggagccaatgcgctccggttcggttcgagcacgctcggcggcgcgatcaat
ggcgtgacgccgacggggcgcacagccgaagggatttatctgcgcggggatatcgggagc
ttcgacaatcttcgtggtctcgtctcggccggcgttgcggccgatcgggtcgatgtctgg
ggcgcagtgagcgtggacagctcagacggcgaccgcgaccatgcgcggcggcgtagcctc
cgcttccacggcaatgccgggcttgctctcacggacagcatcacgacgcgcctctatgcg
agctacaacaatatcgaccagcaattgcccggtgcgctgacgcgcgaggaagcgctgacc
acgccccgcaaggccaatgccgcgagcgttgcgggtgatcaggcgcgcgatatcgaatcg
ctgcgcattcaaagccgcacccgcgtggatctcgggtcgacgaggctcgacgtcggggtc
ttcgtcaatgcaaagacgctgcatcatcccatctatcagcttgtggaccagaagagcctc
gatcgcggcggctttttccgcctcgaccatgccagcggagccatcgaggcgaccctcgga
ggcgaacttcgcgcagggaacgtccattcgcggcgtttcgtgaacctcgcgggccgtcgg
ggcgcgaggaccttcgacgccgagcagtttgcgcgcaccgcaacgctctatggcgagctt
cggttgaagcccgccgcgggcctgtcgctgattgcgggcggcgtttatgccgacggcgtg
cggcgccagcgcgagacgttcagcaacgggccggcggtcaatagagctcgcgccgacttt
gatgcattctccccgaagttcggtgtgcttctcgacgccatgccgggggtgcagatttat
ggcaactatagccgctcggtcgaatttcccggctttatcgaactcgcgcagctcgccgct
ttcgtcccgctcgcgccccagcgcgcatggacggcggaaatcggaacgcggggaacgcgc
gggctgctgagctgggacctttcgctctatcgcgctgatatcaagggcgagctgctgcaa
tatacgcccagcgccgacattcccgcgtcgaccttcaatgcggccaacacgcgccacgag
gggatcgaggcggcgctggagatctcgccgaccgactggctgcgactgcggcaggtctat
acttacagcgattttcgctttcgcggcgacgccgtctatggcgataaccgcctgccggtc
gtcccgcgtcacgtctatcgtgccgagctgcgcctcggcggcgatgcgttgcatgtcgcg
ccggccatcgaatgggtcgctgagggaccttttgtcgattatcgtaacaggacccgcaca
ccgggctatgcgctgcttggtttcaccgccggcatgcgcgtcgcagatgggatcgatgcc
tttctcgacgcgcgcaatctcacagcgaggaaagcaatcggcgacatcagcgctgcgatc
gacgtgactgcagcctcggccatctattatccggtcgagcgccgcgcggtgtcggcgggg
ctgcgcgcacgcttttga
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