Sphingopyxis sp. 113P3: LH20_03590
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Entry
LH20_03590 CDS
T04069
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphp03400
]
LH20_03590
DNA repair and recombination proteins [BR:
sphp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LH20_03590
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Ortholog
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GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_30
AAA_16
AAA_22
Lon_C
AAA
SLFN-g3_helicase
AAA_24
AAA_5
NTPase_1
RecA
nSTAND3
CobU
Glyco_hydro2_C5
AAA_14
ATPase_2
DUF7125
AAA_29
ABC_tran
Helicase_RecD
CbiA
Zn_ribbon_6
Ribosomal_L37e
Motif
Other DBs
NCBI-ProteinID:
ALC11029
UniProt:
A0A0M3QCJ1
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Position
765542..766903
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AA seq
453 aa
AA seq
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MAKAKRQYVCQNCGAVSYRWQGQCADCGEWNTLVEEAAESVFSAKHDLTKGGRALALETL
NAHSPMPERMLCGIAEFDRALGGGFVAGSATLIGGDPGIGKSTLLLQAAGRLARAGRTVV
YISGEEAAAQVRLRAQRLGLGDAPVALASATSVRDILATLDRQTADFVVIDSIQTMHSDL
IDSAPGTVSQVRASAQELIRYAKDSGAAIVLVGHVTKDGTIAGPRVLEHMVDTVLSFEGE
RSHLYRILRAVKNRFGGTDEIGVFAMGEEGLGEVANPSSLFLTDRSRDVPGSVVFPALEG
TRPVLVEVQALTVRLASGATPRRAVVGWDSGRLAMVLAVLEARCGLQMGSAEVYLNIAGG
YRLTDPAADLAVAAALISAFSDRPVPADAIVFGELSLSGEVRPVAHDALRLREAAKLGFS
RGWGPEGMKGVGGISVTGFARLGELVDLMLGRD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcgaaacgccaatatgtctgtcagaattgcggtgcggtgtcgtaccgctgg
caggggcaatgcgcggattgcggggaatggaacacgcttgtcgaggaggcggccgaatcc
gtcttttcagcaaagcatgacctcaccaaaggcgggcgcgcgctagcgctcgaaacgttg
aatgcgcacagccccatgcccgaacggatgctctgcggaattgccgagttcgaccgtgcg
ctagggggcggtttcgttgccgggtcggcgaccttgatcgggggcgatcccgggatcggc
aagtcgacgctgctgctccaggcagcgggcaggctcgcgcgggccggccgaacggtcgtc
tatatcagcggcgaggaggctgcagcgcaggtccggcttcgcgcgcagcggctggggctc
ggcgatgccccggtcgcgcttgcaagcgcgacctcggtgcgcgacattctcgcaacgctc
gaccggcagacggccgatttcgtcgtcatcgattcgatccagacgatgcacagcgacctc
atcgacagcgcgccggggacggtgagccaggtacgcgcaagcgcgcaggagctgatccgt
tacgccaaagacagcggggcagcgatcgtgctcgtcgggcacgtgacgaaggatggcacg
atcgccgggccgcgcgtgcttgaacatatggtcgacacggtgctgtccttcgaaggggag
cgcagccacctttatcgcatccttcgtgcggtgaagaaccgcttcggcggtacggacgag
atcggtgtattcgcaatgggcgaagagggcctcggcgaagtcgccaacccctcgagcctt
ttcctcaccgatcgcagccgcgatgtcccggggtcggtggtcttccccgcgctcgagggg
acacggccggtcctcgttgaggtgcaggcgctcaccgtgcggctcgcgagcggtgcaacg
ccccgccgcgcggtcgtcggatgggacagcgggcggcttgcgatggtgctcgcggtgctc
gaggcgcgctgcgggcttcagatggggagcgcggaagtctatctcaacattgcgggcggc
taccgcctgaccgatccggcggcggaccttgctgtcgcggccgcgctgatctcggccttc
agcgaccggccggtgcctgccgatgcgatcgtcttcggcgagctatcgctctcgggcgag
gtgcgccccgttgcgcacgacgccctccggctgcgtgaggcggcaaagctcggtttttcg
cgcggctgggggcctgaggggatgaaaggcgtcggcgggatttcggtgacgggttttgcg
cgtctcggcgaactcgttgacctgatgctcgggcgcgactag
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