Sphingopyxis sp. 113P3: LH20_05640
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Entry
LH20_05640 CDS
T04069
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp03030
DNA replication
sphp03430
Mismatch repair
sphp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH20_05640
03430 Mismatch repair
LH20_05640
03440 Homologous recombination
LH20_05640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphp03032
]
LH20_05640
03400 DNA repair and recombination proteins [BR:
sphp03400
]
LH20_05640
Enzymes [BR:
sphp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH20_05640
DNA replication proteins [BR:
sphp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LH20_05640
DNA repair and recombination proteins [BR:
sphp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LH20_05640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ALC11433
LinkDB
All DBs
Position
1152090..1152983
Genome browser
AA seq
297 aa
AA seq
DB search
MTSSDHLETLAQTLEATGDYRVIRRLKPHPRTVPPPGTPLRLGLVVDVETTGLDPQRDEI
IELAMTPFNYGLDGTVFSVGDSFQGLRQPSEPIAPEITAITGITNEMVAGQIIDPAAVAT
FAAPASLVIAHNAAFDRRFLERFSDVFSTKPWACSFSQIDWAAEGFEGSKLAYLAQAAGF
FYDRHRAMHDCLATVELLAMRLPRSGVTGLSRLLDGARAVSWRIWAENSPFDLKDVLKAR
GYRWNGDPGPQPRAWYIDVPEAQREAELRFLRTEIYRYEVDPPVRRIDAYDRFSDRI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgacatcttctgaccatctggagaccctggcgcagacactggaggccacgggggattac
cgggtgatccggcgtctcaagccacaccctcgcaccgttccgcctcccggcaccccgctg
cgccttggcctggtggtcgatgtggagaccacggggctcgaccctcagcgcgacgagatc
atcgaactcgccatgacgccattcaactacggcttggatggcaccgttttcagcgtgggc
gacagcttccaagggctgcgtcagccgagcgagcctatcgcaccggaaatcaccgcgatc
acgggcatcaccaacgagatggtggccggccagattattgatcccgcagcggtagccaca
ttcgcggcgccggcttcgctcgtcatcgcgcacaacgcggcgttcgaccgccgctttctt
gaacgattcagcgacgtgttctcgacgaagccgtgggcttgctcgttcagccagatcgat
tgggctgcggaggggttcgagggctcgaaactcgcctatctcgctcaggccgcaggcttc
ttctatgaccgtcaccgcgcgatgcacgactgtcttgctacggtcgagttgctggcaatg
cggctgccccgatctggcgttacgggtctcagccgactcctggacggcgctcgtgccgtt
tcttggcgcatctgggcggagaactcgcccttcgacctcaaggatgtcctcaaagcgcgg
ggataccgttggaacggcgaccccggcccgcagccgcgcgcatggtatatcgacgttccc
gaagctcagcgcgaggcagagctgcggttcttgagaacggaaatctatcggtatgaggtc
gatcccccggttcggcggatcgatgcgtatgatcggttttcagaccggatctga
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