KEGG   Sphingopyxis sp. 113P3: LH20_05690
Entry
LH20_05690        CDS       T04069                                 
Name
(GenBank) type IV secretion system protein VirB4
  KO
K20530  type IV secretion system protein TrbE [EC:7.4.2.8]
Organism
sphp  Sphingopyxis sp. 113P3
Pathway
sphp02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sphp00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LH20_05690
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphp02044]
    LH20_05690
Enzymes [BR:sphp01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     LH20_05690
Secretion system [BR:sphp02044]
 Type IV secretion system
  Trb secretion system protein
   LH20_05690
SSDB
Motif
Pfam: P-loop_TraG CagE_TrbE_VirB AAA_10 TraG-D_C TrwB_AAD_bind AAA_22 AAA_16 DUF87 AAA_29 FtsK_SpoIIIE ABC_tran nSTAND3 T2SSE ORC-CDC6-like AAA_7
Other DBs
NCBI-ProteinID: ALC11443
UniProt: A0A0M3QCU7
LinkDB
Position
1158737..1161181
AA seq 814 aa
MNFSEYRSKSACLADFLPWACLVAEGVVLNKDGSFQRSARFRGPDLDSATPAEMVAVTAR
LNSALRRLGSGWAVFVEARRLAAQSYPISDFPDPVSRLVDIERREQFREEGAHFESSYYL
TLVWLPPAEERARAEAWLFEGGVKKGVDPWQWLVGFIDRTERLLHLVEGFMPEARWLDDG
ETLSYLHSTVSTKVQRVRVPETPAYLDALLADEPLVGGLEPRLGEHHLRTLTITGFPSET
FPGLLDELNRLAFAYRWSSRAIMLDKTDAARVLTKIRRQWFAKRKSVAAILKEVMTNEAS
VLVDSDAANKAADADLALQELGADSAGIAYVSVSVTVWDRDSARAAEKLRLAEKTIQARD
FTCTIEGVNALEAWLGSLPGHVYANVRQPPLSTLNLAHLIPLSAVWAGADRDEHLGDAPL
LYGKTEGSTPFRFSLHVGDVGHCLIVGPTGSGKSVLLGIMALQFRRYRASQIFVFDFGGS
IRAAALAMGGDWQDLGGSLFNAEGSVALQPLARIDEAAERAWAAEWLAALLAGEGVSIDL
AAKEHLWSALCSLATAPRPERTLTGLAVLLQSQMLKQALAPYLVGGPWGRLLDAEEERLG
DARVEALETEGLVGTSSAAAVLSYLFHRIEGRLDGSPTLIIIDEGWLVLDSPAFTSQLRA
WLKTLRKKNASVVFATQSLADIEGSHIAPAIVESCPTRIFLPNDRAAEPQIARIYERFGL
SDRQIEILSRATPKRDYYCQSRRGNRLFELGLGDIALAFAAASSKADQLQITELIEAHGR
AHFAAAWLRHRRLDWAAELFSSAGTETPIEGESP
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgaatttctccgaatatcgatcgaaatccgcctgccttgcagactttctcccttgggcc
tgcctggtggcggagggcgtggtgctgaacaaggacgggtcgttccagcgatccgcgcgc
tttcgcggcccggaccttgacagcgccacgcctgctgaaatggtcgcggtcaccgcgcgc
ctcaatagcgcgctgcggcgcctcggatcgggctgggcggttttcgtggaagcccggcgg
ctcgccgcgcaaagctatccgatctcggactttcccgatcccgtctcgcgcctcgtcgat
atcgagcgtcgcgagcagtttcgcgaggaaggcgcgcatttcgagagtagctactatctg
accctcgtctggctgccgcccgccgaggagcgtgcgcgcgccgaagcctggctttttgaa
ggcggcgtgaagaagggggtcgacccctggcaatggctcgtcggcttcatcgatcgcacc
gagcggctcctgcatctcgtcgaagggttcatgcccgaggcgcgctggctcgatgacggg
gaaacgctgagctatctccacagtacggtctcaacgaaggtgcagcgcgttcgcgtcccc
gagacgcccgcctatcttgatgcgcttctcgcagacgagccgctcgtcggcgggctcgaa
ccgcgtcttggcgagcatcatttgcgtacgctgacgatcacgggctttccgagcgaaacc
tttcccggcctgctcgacgagctcaaccggctcgcctttgcctatcgctggtcaagccgc
gcgatcatgctcgacaagaccgacgcggcgcgggtgctcactaaaatccgccggcagtgg
ttcgcaaaacgcaagtccgttgccgcgatcctcaaggaggtcatgaccaacgaggcgtcg
gttctcgtcgacagcgatgcggcaaacaaggcggccgatgcggacctcgcgctgcaggaa
ctcggcgccgacagcgccggcatcgcctatgtctcggtgagcgtgacggtatgggaccgg
gattcggcacgggcggcggagaagctgcgccttgccgagaagaccatccaggcccgcgat
ttcacctgcacgattgaaggcgtgaatgcgctcgaggcctggctcgggagcctgccggga
catgtttatgccaatgtccgccagcctcccctctcgaccttgaaccttgctcatctgatc
ccgctttcagcggtttgggcgggtgccgaccgcgacgagcatcttggggatgcacccttg
ctatacggcaagaccgaaggctcgacgccgttccgcttctcgctgcacgtcggcgacgtt
ggccattgcctcatcgttggtccaaccggatcgggaaaatcggtgctgcttggcatcatg
gcgctgcagttccgccggtaccgcgcgagccagatctttgtcttcgatttcggaggctcg
atccgcgcggccgccctggcgatgggcggtgactggcaggatctcggcggctcgctcttc
aacgccgaaggcagcgttgcgctgcaaccgcttgcgcgcatcgacgaggcggccgagcgc
gcctgggcagccgaatggctcgccgcgctactcgcgggcgagggggtttccatcgacctt
gcggcaaaggagcatctctggtcggcgctttgctcgctcgccaccgcgccgaggcccgag
cggacgctgacggggcttgcagtgctccttcagtcgcaaatgctcaagcaggcgctcgcg
ccctatctcgtcggcggtccctgggggcgactgctcgatgccgaggaagaacggctcggc
gacgcgcgggtcgaggcgctcgagaccgaggggcttgtcggcacatcctccgcagccgcc
gtgctttcctatctttttcaccggatcgaggggcgtctcgacggctccccgacgctcatc
atcatcgacgagggctggctcgtcctcgatagcccggccttcacctcgcagcttcgcgca
tggctgaagaccctgcgaaagaaaaatgcgagcgtggtctttgccacgcagagtctcgcc
gatatcgaaggctcgcatattgcgccggcgattgtcgaaagctgcccgacgcggattttc
ctgccaaatgatcgcgcggccgaaccgcagatcgcacgcatctatgagcgctttggtctc
agcgaccgccagatcgagatattgagccgggcgacaccgaagcgcgactattactgccag
tcgcgccgcggcaaccgtcttttcgaattgggtctcggcgatatcgcgctcgcctttgcc
gccgcttcgtccaaggccgatcaacttcagatcaccgagctgatcgaggcccacggccgc
gcgcactttgccgcggcctggcttcgccaccgccgcctcgactgggcagccgagctcttc
tcttccgctggaaccgaaacgccaatcgaaggagaaagtccgtga

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