Sphingopyxis sp. 113P3: LH20_06275
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Entry
LH20_06275 CDS
T04069
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp00300
Lysine biosynthesis
sphp00470
D-Amino acid metabolism
sphp01100
Metabolic pathways
sphp01110
Biosynthesis of secondary metabolites
sphp01120
Microbial metabolism in diverse environments
sphp01230
Biosynthesis of amino acids
Module
sphp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LH20_06275
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LH20_06275
Enzymes [BR:
sphp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LH20_06275
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ALC11556
UniProt:
A0A0M5IWU1
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Position
1275273..1276502
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AA seq
409 aa
AA seq
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MKPHGPIPPGYSADADGMLIVGGERADALAARAGDTPLFVYDSALLKARVAEWRAAMPSE
VQLHYAMKANPFAPLLTFMAGIVDGFDVASGGELAAALASGMEAEHISFAGPGKRDRELE
AAIKAGATINLESAGEAERALHIAARLGARPRLAVRVNPDFDLKGSGMKMGGGAKPFGVD
AEDVPALVRRLVDAGADWQGFHIFAGSQALSAAAIAETQAQTVALAARLANGIGAAPPLV
NLGGGMGVPYFPGDSAVDTAAVGAALAETLAARDPVLGASRFAMELGRWLVAEAGVYITR
IVDRKVSHGEIFLVTDGGLHHQLAASGNFGTVIRRNYPIAIASHFGAEAVETVSVVGCLC
TPLDRLGDQVALPRAEAGDLVAIFQAGAYGASASPAAFLGQGPAREILV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcatggccccattcctcctggctattcggcggacgccgacggcatgctcatc
gtcggcggcgagcgcgccgacgcgctcgcggcgcgcgccggggatacgccgctcttcgtc
tacgacagcgcgctcctgaaggcccgcgtcgccgagtggcgcgcggccatgccgagcgag
gtgcagcttcattatgcgatgaaggcgaacccctttgcgccgctcctcactttcatggcc
ggcatcgtcgacgggttcgatgtcgcatcggggggcgagcttgccgcagctctcgcgagc
ggcatggaggccgagcacatcagcttcgcaggccccggcaagcgcgaccgcgaactcgaa
gcggcgatcaaggcaggggcgaccatcaaccttgaatcggcaggcgaggccgagcgcgcg
ctccatatcgcggcgcgcctcggcgcgcgtccgcggcttgcggtgcgggtcaatcccgat
ttcgacctcaagggctcggggatgaaaatggggggcggcgccaagcccttcggggtcgat
gccgaggacgtgcccgcgctcgtccggcgcctcgtcgacgcgggcgccgactggcaaggc
tttcatatctttgccggatcgcaggcgctcagcgccgccgcgattgccgagacgcaggcg
cagaccgttgcgcttgcagcgcgcctcgcaaacggcattggcgccgcgcccccgctcgtg
aaccttggcggcgggatgggcgtcccttatttccccggcgacagcgcggtcgatactgcg
gctgttggagccgcgctcgccgagacactcgcggcgcgcgatccggtgcttggcgcgagc
cgttttgcgatggagctcgggcgctggctcgttgccgaagcgggcgtctacatcacgcgc
atcgtcgaccggaaggtcagccacggcgagatatttctcgtcaccgatggcgggctccat
caccagcttgctgcgagcggcaatttcgggacggtcattcgccgcaactacccgatcgcg
atcgcgagccatttcggcgcggaggcggtcgagacggtttcggttgtcggctgtctttgt
accccgctcgaccgtcttggcgaccaggttgcgctgccgcgcgccgaagcgggcgatctg
gtcgcgattttccaggcgggcgcctatggcgcctcggcaagccccgccgcgtttctgggc
cagggacccgcgcgcgaaatcctcgtctga
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