Sphingopyxis sp. 113P3: LH20_06840
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Entry
LH20_06840 CDS
T04069
Name
(GenBank) ATPase AAA
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LH20_06840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphp03019
]
LH20_06840
03009 Ribosome biogenesis [BR:
sphp03009
]
LH20_06840
04131 Membrane trafficking [BR:
sphp04131
]
LH20_06840
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphp04147
]
LH20_06840
Messenger RNA biogenesis [BR:
sphp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
LH20_06840
Ribosome biogenesis [BR:
sphp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
LH20_06840
Membrane trafficking [BR:
sphp04131
]
SNARE
SNARE associated proteins
Others
LH20_06840
Autophagy
Aggrephagy
Other aggrephagy associated proteins
LH20_06840
Exosome [BR:
sphp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LH20_06840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_33
AAA_22
AAA_5
CDC48_2
AAA_2
AAA_14
TIP49
IstB_IS21
AAA_lid_PRS2_C
nSTAND3
AAA_28
AAA_18
Mg_chelatase
NPHP3_N
RNA_helicase
Vps4_C
Sigma54_activat
AAA_7
AAA_24
AAA_3
Zeta_toxin
AAA_30
DUF815
ABC_tran
AAA_17
AAA_11
AAA_19
TsaE
ATPase
AAA_25
Parvo_NS1
Viral_helicase1
NB-ARC
Sigma54_activ_2
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
ALC11666
UniProt:
A0A0M4CNF2
LinkDB
All DBs
Position
1392043..1394367
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AA seq
774 aa
AA seq
DB search
MADAPVKEKQVKLQVANARAEESGGGIARIPRAAMAELGVTEGDVIQLSGKRVTASRVMA
PYPEDEGLEVVRLDGLQRANAGAGAGDMVILSRAETRPATRVVFAPAQENLRLQGSAIAL
KRSFFGRPLVAGDTVATAGQQRVSAGDMPPQLRQMLNAPAYALAEVRLSVVSASPKGVVY
IDENTEVELLPEYQEPQDTRRTDVTYDDLGGLGETIDQLREMVELPLRYPELFRRLGVDP
PRGVLLHGPPGTGKTRLARAVANESEAQFFLINGPEIMGSAYGESEKRLRDVFEQAAKAA
PSILFIDEIDSIAPKRGQVQGEAEKRLVAQLLTLMDGLEPRTNLVVIAATNRPDAIDEAL
RRPGRFDREIVIGVPDESGRREILGIHTRGMPLAEDVDLAELSRTTFGFVGADMAALTRE
AAIEAVRRIMPRLNLSEGTIPPEVLDELRVTREDFNNALKRVQPSAMREVMVQAPKTRWS
DIGGLDAARDKMIEGIELPLKHPDAFRRLGIRPAKGFLLYGPPGTGKTLLAKAAARESDA
NFIAIKSSDLLSKWYGESEQQIARLFARARAVAPTIIFIDELDSLVPARGSGTAGEPQVT
ERVVNTILAEMDGIEEMQSVVVIGATNRPNLIDPALLRPGRLDELIYVTVPDAGGRRRIL
EIHTIKMPLASDVDLDALAARTERFTGADLEDLVRRAGLAALKRSMTSESVTMEDFETAL
KDTRASVTEAMERDYEKIQGEIKQQAMSVNPIGFFAPGMLKPVREQKHADEARD
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
ttggccgacgcaccggttaaagaaaagcaagtcaagctccaggtggcaaacgcccgcgcc
gaagaaagcgggggcggcatcgcgcgcatcccgcgcgcggcgatggccgagctcggggtg
accgagggcgatgtgatccaactcagcgggaagcgggtgacggcatcgcgggtcatggcg
ccttatccggaagatgaggggctcgaggtcgtccgcctcgatggcctccagcgcgcgaat
gcgggcgcgggcgcgggtgacatggtgatcctgagccgcgccgagacgcgccctgcaacc
cgcgtggtgttcgcgcccgcccaggagaacctgcgccttcagggctcggcgatcgcgctc
aagcgcagctttttcggccgaccgctcgtcgcgggcgatacggtcgcgaccgcgggtcag
cagcgggtgtcggcgggcgatatgcccccgcagcttcgccagatgctgaacgcacccgcc
tatgcgctcgccgaagttcgcctcagcgtggtgtcggcaagccccaagggcgtcgtttac
atcgacgagaataccgaggttgaactgcttcccgaatatcaggagccgcaggatacccgc
cgcaccgatgtcacttatgacgatctcggcgggctcggcgagacgatcgaccagcttcgc
gagatggtcgaattgccgctgcgctatcctgaactcttccgccgcctcggcgtcgatccg
ccgcgcggggtgctgctgcacggaccgccgggcacgggcaagacccgcctagcgcgcgcg
gttgcgaacgagagcgaggcgcagttcttcctgatcaacgggcccgagatcatggggtcg
gcttacggtgagtccgaaaagcgcctgcgcgacgtgttcgagcaggctgcaaaggcggcg
ccgtcgatcctttttatcgacgagatcgattcgatcgcgccgaaacgcgggcaggtgcag
ggcgaggctgaaaagcggcttgtcgcgcagctcctgaccttgatggacgggcttgagccg
cggaccaatcttgtcgtcatcgcggccaccaaccgccccgatgccatcgacgaggctttg
cgccgcccgggccgttttgaccgcgaaatcgtgatcggcgtgcccgacgagagcggtcgc
cgcgagatcctcggaattcacactcgcggcatgccgctcgccgaggatgtcgaccttgcc
gagctctcgcgcacgacgttcggctttgtcggcgccgacatggccgcgctcacccgcgag
gccgcgatcgaggcggtgcggcggatcatgcccaggctcaacctttcggaggggaccatt
ccgcccgaggtgctcgacgagcttcgggtcacgcgcgaggatttcaacaatgcactgaaa
cgcgtgcagccctccgcaatgcgcgaggtaatggtgcaggcacccaagacgcggtggagc
gacattggcggccttgacgctgcacgcgacaagatgatcgagggcatcgagctgcctttg
aagcatcccgatgccttccgccggctcgggatccgtcccgccaagggctttctcctctat
ggtccccccggcacaggcaagacgctgctcgcgaaagcggcggcgcgcgagtccgatgcc
aatttcattgcgatcaagtcgtcggatcttctctccaaatggtatggcgaaagcgagcag
cagatcgcccggcttttcgcgcgcgcacgcgccgttgcgccgacaatcatcttcatcgac
gaactcgatagcctggtgcccgcgcgcggcagcggcaccgcgggcgaaccgcaggtcacc
gagcgcgtcgtcaacacgatccttgccgagatggacgggatcgaggagatgcagtcggtt
gtcgtgatcggcgcgaccaaccggccgaacctcatcgacccggcgctgcttcgcccaggg
cgactcgacgagctcatctatgtgaccgtccccgatgccggagggcgcaggcgcatcctt
gaaatccacacgatcaagatgccgctggcgagcgatgtcgatctggacgcgctcgccgcg
cgcaccgagcgctttacaggcgcggatcttgaagatctcgttcgccgggcgggtcttgca
gcgctcaaacgctcgatgacgagcgagagcgtgacgatggaggatttcgagaccgcgctc
aaggatacgcgcgcctcggtgaccgaggcgatggagcgcgactatgaaaagatccagggc
gagatcaagcagcaggcgatgagcgtgaacccgatcggctttttcgcgccgggtatgctg
aagcccgtgcgcgagcaaaagcacgccgacgaggcgcgcgactag
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