Sphingopyxis sp. 113P3: LH20_08635
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Entry
LH20_08635 CDS
T04069
Name
(GenBank) hypothetical protein
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp00061
Fatty acid biosynthesis
sphp00071
Fatty acid degradation
sphp01100
Metabolic pathways
sphp01212
Fatty acid metabolism
sphp02024
Quorum sensing
Module
sphp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LH20_08635
00071 Fatty acid degradation
LH20_08635
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH20_08635
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphp01004
]
LH20_08635
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphp04147
]
LH20_08635
Enzymes [BR:
sphp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LH20_08635
Lipid biosynthesis proteins [BR:
sphp01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
LH20_08635
Exosome [BR:
sphp04147
]
Exosomal proteins
Exosomal proteins of breast milk
LH20_08635
Exosomal proteins of breast cancer cells
LH20_08635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ALC12011
UniProt:
A0A0M5ILK8
LinkDB
All DBs
Position
complement(1752940..1754430)
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AA seq
496 aa
AA seq
DB search
MEVRRISDALKVRAQHQANEIAHDDTRRQISFADWDREADEVGGGLAAAGLVPGDRVFLP
ISNARAVEMAIAVFAVFRAGGIACPVNTRLNPREIADYAALCEPRFCLTDAPELVKDLNL
AGSWHVDAMPRDLSALPDQASLDPMADAEILGTSGTTGKIKGVVVSHPDLMTGVTGYNMD
RSRSTLNALPLTGSGGNIGIVMLPARGGATAITQPKFDPKGFLELAREKQPDLVYLVPSM
LRLVLDHPEVANYDMAGVKYLMTGTAPLPHDSVKRAAELWPHLRIRNSYGMSEGGVGVGT
RTREQVMKPGCVGKLPAHMQLRDENGEVITQPGVVGEIYGWQKHARRYWKDPEATAISFK
GGWTKTGDLGYVDEDGDLIMAGRSKELIIRGGYNITPLEIETVLHLHPSVQQAAVVGVPH
EVLGEDIAAAVTLRPGTEATSPDEIIEFCKAHLADNKVPRTLVVVDEMPLNPNGKILKKD
LAEPLAKAAEARRRAA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggaagtacgccgcatcagcgatgcattgaaggtgcgcgcccagcatcaggccaatgag
atcgcacatgacgatacgaggcggcagatcagctttgccgattgggaccgcgaagccgat
gaggtgggcggcggacttgcagccgcaggccttgtccccggcgaccgcgtctttttgccg
atcagcaatgcgcgcgccgtcgagatggcaattgccgtctttgctgtgtttcgcgccggc
ggaattgcctgcccggtgaacacgcgtctcaatccccgcgaaattgccgattatgcggcg
ctgtgcgaaccgcgtttctgcctcaccgatgcccccgagctggtgaaggatctgaacctc
gcaggaagctggcacgtcgatgccatgccgcgcgacctctcggcgcttcccgatcaggca
agcctcgacccgatggccgacgccgagatcctcggcacctcgggcacgaccggcaagatc
aagggggtcgtcgtctcgcaccccgatctcatgaccggggtcacaggttataatatggac
cggtcgcgctcgacgctcaacgcgctgcccctcaccggctcgggtggcaatatcgggatc
gtgatgctccccgcgcgcggcggcgccacggcgatcacccaacccaaattcgaccccaag
ggtttcctcgagctcgccagggaaaagcagcctgaccttgtctatcttgttccgtcgatg
ctgcgcctcgtgctcgatcatcccgaggtcgcgaactatgacatggcgggggtcaaatat
ctgatgaccggcaccgctccgctcccgcatgattcggtgaagcgcgcagcggagctttgg
ccgcaccttcggatccggaatagttacgggatgtccgagggcggcgtcggcgtcggcacg
cgaacccgcgaacaggtgatgaagccaggctgcgttggcaagctgccggcgcacatgcag
ctgcgtgacgagaatggcgaggtcatcacccaaccgggggtcgtgggcgaaatctacggc
tggcagaagcatgcccgtcgctactggaaagaccccgaagccaccgccatcagcttcaag
ggcggctggaccaagaccggcgaccttggctacgtcgacgaggacggcgacctgatcatg
gcggggcgttcgaaggaactgatcattcgcggcggctacaatatcacgccgctcgagatc
gagaccgtgctccaccttcatccctcggtccagcaggcggccgtcgttggcgtgccgcat
gaggtgctgggcgaagatatcgccgccgcggtaacgctgcgtcccggtaccgaggccacg
agcccggacgagatcatcgaattctgcaaggcgcatctcgctgacaacaaggtgccgcgt
accctggtcgtggtcgacgaaatgccgctcaacccgaacggcaagatcctgaagaaagac
ctcgccgaacccttggccaaggccgcagaagcgcggcgccgggcagcctga
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