Sphingopyxis sp. 113P3: LH20_08715
Help
Entry
LH20_08715 CDS
T04069
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphp03016
]
LH20_08715
Enzymes [BR:
sphp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LH20_08715
Transfer RNA biogenesis [BR:
sphp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LH20_08715
Prokaryotic type
LH20_08715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ALC12027
UniProt:
A0A0M4CRY6
LinkDB
All DBs
Position
complement(1767907..1768647)
Genome browser
AA seq
246 aa
AA seq
DB search
MTRFALTIEFDGRPFMGWQRQSHGPSVQQAIEEAVTRITGEEAAVHGAGRTDAGVHAIAM
RAHVDIEKPLTPFRLMEALNAQLRPAPVAVLACETVADDWHARFSCIGRSYEYRIVNRRA
PLTWDKGLSWQVAKPLDADAMHGAAQLLVGRHDFTTFRSVHCQAASPVKTLDRIRVSRHG
DEIIVETAARSFLHHQVRSMVGCLVMVGEGKWAARDLKAALDAADRGALGLNAPPDGLFF
VEARYP
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
ttgacccgcttcgccctcaccatcgaattcgacggccgccctttcatgggctggcagcgc
cagtcgcacgggccgagcgtacagcaggcgatcgaggaagcggtgacgcggatcaccggc
gaggaagccgccgtgcatggcgcaggacgcaccgatgccggcgtccacgcgatcgcgatg
cgcgcgcatgtcgatatcgaaaagcctctcacgcccttccggctgatggaggccttgaat
gcgcagcttcgccccgccccggtcgcggtgctcgcatgcgagacagtggccgatgactgg
catgcgcgcttttcgtgcatcggacgctcctatgaatatcgcatcgtcaaccgccgggca
ccgctgacctgggacaaggggctatcgtggcaggttgcaaagccgctcgatgccgacgcg
atgcacggcgctgcgcagctgctcgtcgggcggcacgatttcacgaccttccgctcggtg
cactgtcaggcggcaagcccggtcaagaccctcgaccggatccgcgtcagccgccacggc
gatgagatcatcgtcgaaaccgcagcacgcagcttccttcaccatcaggtgcgctcgatg
gtcggctgcctcgtgatggtcggcgaaggaaaatgggcggcacgcgacctcaaggcggcg
ctcgacgccgcagaccgcggcgcgctcgggctgaatgcgccgcccgacgggctctttttc
gttgaagcgagatatccgtag
DBGET
integrated database retrieval system
