Sphingopyxis sp. 113P3: LH20_09210
Help
Entry
LH20_09210 CDS
T04069
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphp02000
]
LH20_09210
Transporters [BR:
sphp02000
]
Other transporters
Pores ion channels [TC:
1
]
LH20_09210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ALC12126
UniProt:
A0A0M4CV78
LinkDB
All DBs
Position
1859841..1864070
Genome browser
AA seq
1409 aa
AA seq
DB search
MATDAPFDAEDGAPAAASPWPRRIARWAAAGLLGLLALVALFLVGLNSDAGRRFVVTQIE
KYEFENGMKIGIGRLDGSLYGAMIVRDFSLSDTKGRFLTSPELRIDWRPFAFLSNHVDVR
SATARLINVERLPEFKPVPDTDEPLLPDIDIDVSRLEVDRIVFAPAVAGERQEARLSGKI
AIADRRAQVNADAETIGANAKGDTLKLLLDAVPEQNRLAMTLDMRAPAGGVLAAMGGFSE
PLTAKLDGRGDWKAWKGTLNANLGASPLARIALTARDGEFAAKGEAQPARLLAGASAALF
SPRTDIDLKARLAERKADLDGRLSSEAFRLGISGGVDLGTNRYEDLALAFVLLRPGALAP
AVRGSGVRASAKLNGAFALPTVEYQANAAALAVNDIVVEALSLSGKARVDADQILIPVAG
RAARIRGLDTVAGGTLTAVRLDGDLAYAEGRILSDNLRLRSPRIDAKAIIVADLNKGFYT
GAIDGRVNNYRIESVGLFNIDTRMDLKTEPRGGWAIAGRVRARSTQLFNSGVRDLLGGNA
VTSADVRYGTDGIVHFSDLRLSAPRLRVTGGQGSYAPDGRIRLAARAQSADYGPLGVEVA
GTISDPRAVLRAERPGLGIGLANLEARINGAPNGYRLAATGDTDYGPLSADVVLLTASGP
LTIDVERADLSGIVMQGRLVQSGAGPFVGRLDAAGQGLGGLVRLSADGPYQAAAINVRAN
NVTLPGPAQLRVGSAVVDADVTLYDQPRVIADIQLASTRIREVDIAVGRVKIDYQDGRGK
AQALVEGVSGVPFRVAVNGDLQPDLWRASVQGRAAGIAFKTASPARIVPGADGYELLPTT
IDLGRGSSARLAGRFGEGVMLQSRLDRVNMTLLNAVYPDMGLGGRASGSLDFEQASADAF
PRADARLTVNNFTRTTAATVSEPVDINFAGKLLADGGEARAVIRKRGSVIGRLQASLRPL
GPGAGPWTTRLSAAPLSGGVRYNGPAETLFSFVGTGEQRLSGPIALAADFSCRVADPCLN
GVVRGNGMVYENLTYGTRLTDIVTNGRFTGNRLEIEQFTATAGDGSIKANGFVSLAAADG
YPMKIEATLDNARLARSDNIGARATGNLTLEKAKGQAALLSGSLRLPETRYRIVREGAAQ
VPVLTGVRRKPPAGRQRISGEGLAAVGGSLFDLIRLDIRLRAPDQIYVSGMGLETEWQAD
VTLQGTTEAPRVTGEIDLVRGTLGFAGRSFDLEEGKVTFPTGDAYDPSIRLLASDTIEEV
TVNVAVSGRAMNPQINFSSVPGLPQDEIVSRILFGDSITTLSPLQAVQLASSLNALRSGG
GGLSPLGALQSATGIDRLRILGPDDTQGRGTALAAGQYISNDIYLEVITDARGYTATQLE
ISLSRALSLLSQAGGSGQSNLSIRYRKDY
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggacgcgcccttcgatgccgaggatggcgcgcccgccgccgccagtccctgg
ccgcgccgcatcgcgcgctgggccgccgccgggctcctcggtcttctcgcgctagtcgcg
ctcttcctcgttggcctcaacagcgacgcggggcgacgctttgtcgtcacccagatcgag
aaatatgaatttgaaaacgggatgaagatcggcatcggtcggctcgacgggtcgctctac
ggcgcgatgatcgtccgcgacttttcgctgtcggacaccaaggggcgcttcctcacctcg
cctgaattgcgcatcgactggcggccctttgccttcctgtcgaaccatgtcgatgtgcgc
tcggcgaccgcgaggctgatcaatgtcgagcgattgcccgaattcaagccggtgcccgac
acagacgagccgctgcttcccgacatcgacatcgacgtttcaaggcttgaagtcgaccgg
atcgtcttcgcaccggctgttgctggcgaacgccaggaggcgcgcctcagcggcaagatc
gctatcgctgaccgccgcgcgcaggtgaatgctgatgccgagacgatcggcgcgaacgcc
aaaggggacacgctgaaactgctgctcgatgcggtgcccgagcagaaccggctcgcgatg
acgctcgatatgcgcgcgcccgcaggcggggtactcgcggcgatgggcggttttagcgaa
ccgctcaccgcgaagctcgatgggcgcggcgactggaaggcttggaaaggaacgctcaac
gccaaccttggcgccagcccgctggcgcgcatcgcccttaccgcgcgggacggcgaattt
gccgccaagggcgaggctcagcccgccaggctcctcgccggagcaagcgccgcgcttttc
tcgcccaggaccgacatcgacctcaaggcgcggctcgccgagcgcaaggccgatctcgac
ggtcgactttcgtcggaggcgttccgcctcgggatcagcggcggtgtcgatctcggcacc
aatcgctacgaggacctcgctcttgcctttgtgctgctgcgccccggggccctcgcgccg
gcggtccgcgggagcggggtgcgtgcaagcgcgaaactcaacggcgccttcgcgcttccg
acggtcgaatatcaggcaaatgcggcggcgctcgcggtgaacgacatcgtggtcgaggcg
cttagcctctcgggcaaggcgcgcgtcgatgccgaccagatcctgatccccgtcgcgggg
cgcgcggcgcgcattcgcgggctcgataccgtcgctggcgggacgctcaccgccgtgcgc
ctcgacggcgaccttgcctatgccgagggccgcatcctcagcgacaatctgcgcctgcgc
tcgccgcgcatcgacgccaaggccatcatcgtcgctgacctcaacaagggcttctacacc
ggcgcgatcgacgggcgcgtcaacaactaccggatcgaaagcgtcggcctgttcaatatc
gatacgcggatggacctcaagaccgagccgcgcggcggctgggcgatcgcaggccgcgtc
cgcgcacgctcgacacagctcttcaattcaggcgtgcgcgaccttctcggcggcaatgcc
gtgacgagcgccgacgtccgctatggcaccgacggcattgtccacttttcggacctgcgg
ctgagcgcgccgcggcttcgcgtcaccggcggacaggggagctacgcgcctgacggccgc
atccggctcgcggcccgtgcgcagtcggccgactatggcccgctcggcgtcgaggtcgcg
ggcacgatcagcgacccgcgcgcggtactgcgggccgagcgtccgggtctggggattggg
cttgccaatctcgaagcgcggataaacggcgcgccgaacggctaccggctcgctgcaacc
ggcgatactgactatggtcccttgtcagctgatgtcgtgctgctcaccgcaagcggaccg
ctgacaatcgacgtcgaacgcgcggacctttcgggcatcgtgatgcagggtcggctggtc
cagagcggggcgggaccctttgtcgggcggctcgacgcggcggggcaggggcttggcggg
ctcgtccgcctcagcgcggacggtccgtatcaggccgccgcaatcaatgtgcgggccaat
aatgtcaccttgccgggcccggcgcagctccgggtcggatcggcagtcgtcgatgccgac
gtcacgctttacgaccagccgcgggtcatcgcggacatccagcttgcttcaacgcgcatc
cgcgaagtcgacattgcggtggggcgcgtgaagatcgattatcaggatggacgcggcaag
gcgcaggccctcgtcgagggggtgagcggcgttccgttccgcgttgcggtaaacggcgac
cttcagcccgacctctggcgcgcctcggtgcaggggcgcgcggcgggcatcgccttcaag
acggcgtcacccgcgcggatcgtccccggcgccgatggttatgaactattgccgaccacc
atcgatctcgggcgcggcagcagcgcccgtcttgccgggcggttcggggagggggtcatg
ctccagagccggctcgaccgcgtcaacatgacgctcctcaacgccgtctatcccgacatg
gggcttggaggccgcgcgagcggcagcctcgatttcgagcaggcgagcgcggacgccttt
ccccgcgccgacgccaggctgacggtcaacaattttacccggacgaccgccgcgacggtg
agcgagccggtggacattaattttgcaggcaagctgctcgccgacggcggcgaggcgcgc
gccgtgatccgcaagcgcggcagcgtgatcgggcggctgcaggcctcgctccgcccgctt
gggccaggcgcgggaccctggacaacgcgcctcagcgccgccccgctgtcgggcggcgtc
cgctacaacggacccgccgaaactctcttctccttcgtcggaacgggcgagcagcgcctc
tccggcccgatcgcgctggcagccgatttcagctgccgcgtcgccgacccctgtctaaac
ggcgtcgtacgcgggaacggcatggtctatgagaatctcacctacgggacgcggctcacc
gatatcgtgacgaacggccgcttcacgggcaaccggctcgagatcgagcaatttaccgca
accgcgggcgacgggtcgatcaaggcgaatggctttgtgagcctcgcggcggccgatggt
tatccgatgaagatcgaggcgacgctcgacaatgcgcggctcgcgcgcagcgacaatatc
ggcgcgcgcgccaccggcaatctgacccttgaaaaggctaaggggcaggcggcactcctc
tcagggagcctcaggcttcccgaaacgcgctaccggatcgttcgcgagggcgcagcgcaa
gtcccggtgctcaccggcgtccgccgcaagcccccggcaggacgccaacgtatcagcggc
gaggggctcgcggcggtcggcggcagtctctttgatctcatccgtctcgacatccgcctg
cgcgcgccagaccagatctatgtgagcggcatggggctcgaaaccgaatggcaggccgac
gtgacgctgcaggggacgaccgaggcgccgcgcgtgaccggcgaaatcgacctcgtgcgc
ggcacgctcggctttgccggccgctcgttcgatcttgaggagggcaaggtgaccttcccg
acgggcgatgcctatgatccctcgatccgccttcttgcgagcgacacgatcgaggaggtg
acggtcaacgtcgcggtctcgggccgtgcgatgaacccgcagatcaatttctcaagcgtg
ccggggctgccgcaggacgaaatcgtctcgcgcattctcttcggcgactcgatcacgacg
ctgtcgccgctccaggcggtgcagctcgcctcgtcattgaatgcgctgcgcagcggcggc
ggggggctcagtcctttgggcgcgctccagtcggcaacgggcatcgaccggctgcgcatt
ctggggcccgatgatacgcagggccgaggcacagcgctcgccgccgggcaatatatttcg
aacgatatctatcttgaggtgatcaccgacgcgcgcggctataccgcgacccagctcgag
atcagcctgtcgcgcgcgctgtcgcttctcagccaagcgggcggctcgggccagtcgaac
ctctcgatccgctatcgcaaggattattga
DBGET
integrated database retrieval system