Sphingopyxis sp. 113P3: LH20_09395
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Entry
LH20_09395 CDS
T04069
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphp03016
]
LH20_09395
Enzymes [BR:
sphp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LH20_09395
Transfer RNA biogenesis [BR:
sphp03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LH20_09395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
ALC12162
UniProt:
A0A0M4D972
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All DBs
Position
1895944..1897281
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AA seq
445 aa
AA seq
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MKSDSPKTFHVKSFGCQMNVYDGERMAEMLGAEGYAPAAEGADADLVILNTCHIREKAAE
KVYSDIGRLKREDGTAPTIAVAGCVAQAEGAEIARRAPSVGVVVGPQAYHRLPELIARAE
RGEKAIDLDMPLDSKFGALPARSGLQRPTAFLTVQEGCDKFCTYCVVPYTRGAETSRPFG
DLIAEARALVAGGVREITLLGQNVNAWDGEDERGRAIGLDGLIRALAAEDGLERIRYTTS
HPNDMSDGLIAAHGEVDKLMPFLHLPVQAGSDRILAAMNRSHSVESYLRVIEHVRKARPD
IAISGDFIVGFPGETEADFEATLDIVRATGYAMAYSFKYSRRPGTPAASMVDQVEEAVMN
DRLQRLQALLNAQQHAFNEATVGRTTRLLLERKGKHEGQLIGKSPWLQSVHVTAPGLAIG
DMVDVEITSAGPNSLGAAVRQLQEA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgactctccaaagacttttcacgtcaaatccttcggctgtcagatgaacgtc
tatgacggcgagcgcatggccgagatgctcggcgctgagggttatgcgcccgcagccgaa
ggcgccgacgccgatctggttatcctcaatacctgtcatattcgcgagaaagccgcagaa
aaggtctattcggacatcggccgcctgaagcgcgaggacggcacggcgccgacgatcgcg
gttgcaggctgcgtcgcccaggccgagggcgccgagattgcgcgccgcgcgccgagtgtc
ggtgtcgtcgtcggaccgcaggcctatcaccgcctccccgagctcatcgcgcgcgccgag
cgcggcgagaaggcgatcgatctcgacatgccgcttgacagcaagtttggggcgcttccg
gcgcgcagtggccttcagcgccccactgccttcctcaccgtgcaggaaggctgcgacaaa
ttctgcacttattgcgtcgttccctatacgcgcggcgccgagacgagccggccctttggc
gatctgatcgccgaggcgcgcgctcttgttgcaggcggggtacgcgagatcacgctgctc
ggtcagaatgtgaacgcgtgggacggcgaggatgagcggggaagggcgatcggtctcgac
gggctcatccgtgcactcgccgccgaggacgggcttgagcgcatccgctacacgacgagc
catcccaacgacatgagcgacgggttgatcgcggcgcatggtgaggtcgacaagctgatg
ccatttctccatctgccggtccaggcgggcagcgaccgcattctggccgcgatgaaccgc
agccacagcgtcgaaagttatttgcgcgtcatcgagcatgttcgcaaagcacgccccgac
atcgcaatctcgggcgatttcatcgtcggcttccccggcgaaaccgaagcggatttcgag
gcgacgctcgatatcgttcgcgcgacgggctatgcgatggcgtacagcttcaaatattcg
cgtcggcctggcacacccgcagcctcgatggtggatcaggtcgaggaggcggtgatgaac
gatcggctccagcggttgcaggcgctcctcaacgcacagcagcacgcgttcaacgaagca
accgtcggacgcacgacgcgtcttctccttgagcgcaagggcaagcacgaaggccagctc
attggcaaatcgccctggcttcagtcggtccatgtcaccgcgccagggctggcgatcggc
gatatggtcgacgtcgaaatcacctcggcaggtccgaacagtctgggcgcggccgtgcgc
caattgcaggaggcttga
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