Sphingopyxis sp. 113P3: LH20_09540
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Entry
LH20_09540 CDS
T04069
Name
(GenBank) diguanylate cyclase
Organism
sphp
Sphingopyxis sp. 113P3
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PilZ
PAS_4
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ALC12191
UniProt:
A0A0M4CPF6
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Position
1921835..1924483
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AA seq
882 aa
AA seq
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MASKRSIVRPLALTASPDESLLDSPGFVARLSRVGQLWHYVFIARALALFAFAFFPGVEG
FLHSSAQWLAMAVGLACDLVLTIIGQMSRQRRSLSPRRLRAATAFAMTLIALGTLLTSAA
MFAATAIPDGSFYFDAFTAILFGAILVAASASAIARPAFFTFAGAAAFGGAIGVASWPFA
VAGMVFLGLLIVMVREDMRHQRRAKRAERLAVSEQQRALNLVRDFERAGRGWFWETDRYG
QLVYISPTIAAKLGRPLGELLGRPFTDIIRKRIGNDESEERALGFSLSSRTPFNDLTVQA
AVPGEERWWSISGHPISNEFGHFFGFRGSGTDLTEKKRSEREINQLARYDTLTGLANRLH
ITELLERALKNHMGQAQPCALLLLDLDRFKAVNDTLGHPVGDQLLQQAAGRLTQIIGDKG
QVGRLGGDEFQIVLPQINQPEKLASIANAIILSLAKPFAIEGEQVRIGSSVGIAVADGEA
VSAAALVRNADLALYAAKDAGRGVYRFYADAMHNQASERKAIEDALRDALAKEELKLLYQ
PIVDIAHERITGFEALIRWQRGDGEAVSPSKFIPIAEESNLIVPIGEWIIRTACDTIAQI
GPGYRVAVNVSPRQFANDRLPATIMSALSASGIAPAQLELEITEGVFLDESPENLEMFQR
LKRTGVRLALDDFGTGYSALGYLKKAPFDKIKIDQSFVLGAADKNSMNAAIISSIVGLAS
ALRMETTAEGVETHDDLALVRRLGCSHVQGYIYGKPMDRDEMLALLRESDGQVVAQGYQS
ARAPRRHILRAINVLSGGYRYEAIVRNISSGGALIEGLWNVPPGTALTLEYAPGMRLDAE
ARWSDDNRVGVRFADTVEIEALIGLAGQAKSSAPRPRAYRAA
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
ttggcgtcaaagcgctccatagtgcgaccgcttgcccttacggcatcgccggacgaatcg
ctgctcgactcgcctggcttcgtcgcccggctgagccgcgtcggacagctttggcactat
gtgttcatcgcgcgggcgctcgcgcttttcgccttcgcattctttcctggcgtcgagggc
ttcctccattcctccgcgcaatggctcgcgatggcggtgggcctcgcctgtgatctcgtc
ctcaccatcattggccagatgtcgcgccagcggcgcagcctttcgccgcgccggctgcgc
gccgcgacggcgttcgcgatgacgctcatcgcgctcgggaccctcctgacatcggcggcg
atgttcgccgcgaccgccattccggacgggagcttctatttcgacgcctttaccgcgatc
ctcttcggcgcgatcctcgttgccgcctcagcgtccgccatcgcccggccggcctttttc
accttcgccggcgccgccgccttcgggggtgcgatcggcgttgcatcctggccgttcgcg
gtcgcgggcatggtatttctggggcttttgatcgtgatggtgcgcgaggacatgcgccat
cagcgccgcgcgaagcgcgccgagcgtctcgcggtcagcgagcagcagcgcgcgttgaac
ctcgtgcgcgatttcgagcgggcggggcgcggctggttctgggagaccgaccgctatggc
cagcttgtctatatttcgccgacgatcgcggcaaagctcggccggccgctcggcgagctt
ctcggccggccgtttaccgacatcatccgcaagcggattggcaatgacgagagcgaggag
cgcgcgctcggcttcagcctctcatcgcgcaccccctttaacgatctcaccgtccaggcg
gcggtgccgggcgaggagcgttggtggtccatctcggggcatcccatctcgaacgaattt
ggtcatttcttcggctttcgcgggagcggtaccgatctcaccgagaagaagcgttcggag
cgcgagataaaccagctcgcgcgctacgacacgctgacgggccttgcgaacaggctccac
atcaccgaactgctcgagcgcgcgctcaagaaccatatgggccaggcgcaaccctgcgcg
ctgctgctgctcgacctcgaccgcttcaaggcggtcaacgatacgctcggccatccggtg
ggcgaccagcttctgcagcaggcggcgggacggctcacccagatcatcggcgacaaggga
caggtgggccggctcggcggcgacgagttccagatcgtgctgccgcagatcaaccagccg
gagaagcttgccagcattgccaacgcaatcatcctcagccttgcaaagccctttgccatt
gagggcgaacaggtgcggatcggctcttcggtgggcattgcggtcgcagacggcgaggcg
gtgagcgcggcggcgctcgtgcgcaacgcagaccttgccctttatgccgcaaaggatgcg
gggcgcggcgtgtatcgcttctatgccgacgcgatgcacaaccaggcgagcgagcgcaag
gcgatcgaggatgcgctgcgtgacgcgctcgccaaggaagaacttaaacttctttatcag
ccgatcgtcgatatcgcgcacgaacggatcaccggttttgaagcgctcattcgctggcag
cgcggcgacggcgaagccgtcagtccttccaaattcattcccattgccgaagaatcgaac
ctgatcgtgccgatcggtgaatggattattcgcaccgcctgcgacacgatcgcgcagatc
ggtccaggctaccgcgtcgcggtcaatgtctcgccgcgccagtttgccaacgaccgtctg
cccgccacgatcatgagcgctctgtccgcatcaggcatcgctccggcccagctggagctt
gagatcaccgaaggggtgtttctcgatgagagccctgaaaatctggagatgttccaacgc
ctgaagcgcaccggagtccggcttgccctcgatgatttcgggaccggctattcggcgctt
ggctatctgaagaaggcgcccttcgacaagatcaagatcgaccagagtttcgttctcggc
gccgccgacaagaacagcatgaatgccgcgatcatctcctcgatcgtcgggctcgcgtcg
gcgctgcgcatggaaacgacggccgaaggggtcgaaacgcacgatgatcttgcgctcgtt
cgccggctgggttgcagccatgtccagggctatatctacggcaagccgatggaccgggac
gagatgctggcgctgctacgcgagagcgacgggcaggtcgtcgcgcagggctatcagagc
gcgcgtgcgccgcgccgccacatcctgcgcgcgatcaacgtgctgagcggcggatatcgt
tacgaggcaatcgttcgcaacatctcctcgggcggggccttgatcgaaggattgtggaat
gtgccgccgggcacggcgctgacgctcgaatatgcgcccggtatgcggcttgacgccgaa
gcgcggtggtcggacgacaatcgcgtcggcgtacgctttgccgacacggtcgagatcgag
gccttgatcggacttgcagggcaggccaaatcctccgccccgcgaccgcgcgcctaccgc
gccgcctga
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