Sphingopyxis sp. 113P3: LH20_11520
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Entry
LH20_11520 CDS
T04069
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LH20_11520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphp03400
]
LH20_11520
Enzymes [BR:
sphp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LH20_11520
DNA repair and recombination proteins [BR:
sphp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LH20_11520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALC12580
UniProt:
A0A0M4D2F6
LinkDB
All DBs
Position
complement(2289853..2290641)
Genome browser
AA seq
262 aa
AA seq
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MGGQKSALLAKSICDWWSLAGVDALVGEKPAGWLLAPPANDPAHRARPPVAAETAPPPLP
PALQRAALADAAPRAEGPVTFPDDWNGFQSFLADHPDVPGSQWDNRRVLPVGAQRAPLML
LTAWPEIDDQREGALFSGAPGKLLDAALKAIGAARDDCYLASLAVTRPPGGRCDARDRAE
LERLLAHHLALADPGKLLLIGGDIVQMAAGLALPDARGRLLDINHSGGRVPAAAIAHPAM
LLARPAHKAAAWDSLKLFNRGR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggcaaaaatcggccttgctggcgaaaagcatctgcgactggtggtcgcttgcg
ggggtagacgcactcgtcggagaaaagcctgcgggctggcttcttgcgccgcccgcaaat
gacccggcgcacagggcgcgtccgcctgtcgcggccgaaaccgcccccccgcccctgcct
cccgcgctgcagcgcgctgccctggcggacgccgccccccgagcagaggggcccgtgacc
ttccccgatgactggaacggctttcagtcgtttctggctgatcatccggacgtgccgggg
agccaatgggacaatcgccgagtgcttcctgtgggcgcgcagcgcgcgcccttgatgctg
cttaccgcctggcccgagattgacgatcagcgcgaaggcgccttgttcagcggcgcgccg
ggaaagcttctcgacgctgcgctgaaggcgatcggggcagcgcgcgatgactgctacctc
gccagtctcgctgtcacacgtccgccgggagggcgctgcgacgcgcgtgaccgcgctgaa
cttgaacgcttgctcgcccatcatctggcgctggccgatcctggaaaactgctgctgatc
ggcggtgacattgtgcagatggcggcaggccttgcgcttcccgatgcgcgtggaaggtta
ctcgatattaaccattcaggcggcagggtacccgcggcagcgatcgcgcatcctgcaatg
ctgctcgcccgtccggcccacaaggcggccgcctgggatagcctcaaactgttcaaccgg
ggacgttga
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