Sphingopyxis sp. 113P3: LH20_11985
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Entry
LH20_11985 CDS
T04069
Name
(GenBank) integrase
Organism
sphp
Sphingopyxis sp. 113P3
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Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
HTH_29
HTH_38
HTH_40
HTH_23
HTH_20
Sigma70_r4_2
rve_3
HTH_28
HTH_11
HTH_IclR
HTH_35
HTH_36
HTH_Tnp_ISL3
HTH_5
HTH_24
TnsD
Motif
Other DBs
NCBI-ProteinID:
ALC12672
UniProt:
A0A0M4CZ92
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Position
2393228..2394529
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AA seq
433 aa
AA seq
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MATTRTDPSYACPDWREAWQVIRLEEIVMIHDLKRQGLSVSAIARQTGLDRKTVRKHLAG
GVKAPVYKPRPPRPRELEPYEPYLRDRIALYPGLSGKRLFREIAAMGFKGGYTTVTDFLR
QMRPPRVVPFERRFETPAGRQAQVDFAQFKVAFSDEPGVTRIFWLFSMVLGHSRWLWGRF
CPTQDLQTVMRCHIDAFDAMGGAPSEVLYDRMKTAVIDEDAEGIVIYNRSLVALLDHYGA
LPRACRPYRAKTKGKIERPYRYIRQDFFLGRTFCNADDLNRQFREWLDTVANVRLHATTR
RIVSEHFAEEQPVLTALPAAPYNAVLTIERRVSHEGMVSVGGNLYSVPDATRKRVVEVQN
HPREIRIFEDRKLIAVHPVLDGRNQRRVDPSHRRLAPPRAATVPPPAGLEITRRSLGFYE
AVGRRLAGSEVRP
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ttggcaacgacccgcacggatccctcctatgcttgcccggattggcgggaggcgtggcag
gtgatcagacttgaggaaattgtcatgatccatgacttgaagcggcaggggctgtcggtg
tcggcgattgcgcggcagacggggcttgaccgaaagacggtacgcaaacacctggccggc
ggcgtgaaggcgccggtgtacaagccccggccaccccgtccgcgggagctggaaccctac
gaaccatatcttcgcgatcgcatcgcgttatatcctgggttgtctggcaagcgtctcttc
cgcgaaatcgctgcgatggggttcaagggcggctacacgaccgtcacggacttcctgcgc
cagatgcggccgccgcgagtggtcccgtttgagcggcgcttcgaaacacccgcgggacgg
caggcccaggtggacttcgcccagttcaaggtggcgttcagcgatgagccgggcgtgacc
cggatcttctggctgttctcgatggtgttgggtcatagccgctggctgtggggtcggttc
tgtccgacccaggatctgcagacggtgatgcgctgccacatcgacgccttcgatgcgatg
ggcggtgccccgtccgaggtgctttacgaccgcatgaaaaccgctgtgatcgatgaggat
gccgagggtattgtgatctacaatcggtcgctggtggccttgctggatcattacggcgct
ttgccgcgtgcatgcaggccctatcgggcgaaaaccaagggcaagatcgaacggccctac
cgctacatccgtcaggacttcttccttggacgcaccttctgcaacgctgatgacctgaac
aggcagttccgcgaatggctggacacggtcgcgaatgttcggttgcatgccacgacccgg
cggatcgtcagcgagcactttgccgaggagcaaccggtcctgacggccttgcctgcggcc
ccatacaatgcggtgctcacgatcgagcggcgagtcagccatgaaggcatggtatcggtt
ggcggcaatctctactcggtgcccgacgctacgcgcaaacgggtcgtggaggtgcagaat
catccccgtgagatcaggatcttcgaggatcgcaagctgatcgcggtgcatcccgttctc
gatggacgcaatcagcgccgggttgatccttcccaccggcggctcgctccgcctcgcgcg
gcaacagtgccgccgcctgcagggcttgagattaccaggcgctcgctgggcttctacgag
gcggtaggacggcgactggccggcagcgaggtacggccatga
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