Sphingopyxis sp. 113P3: LH20_12205
Help
Entry
LH20_12205 CDS
T04069
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphp03016
]
LH20_12205
Enzymes [BR:
sphp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LH20_12205
Transfer RNA biogenesis [BR:
sphp03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LH20_12205
Prokaryotic type
LH20_12205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ALC12715
LinkDB
All DBs
Position
2444665..2445741
Genome browser
AA seq
358 aa
AA seq
DB search
MTKARRAALFVLLTLALAAAALWLLQRPAGLWLFERGAAEAAGRDPLADLPDGLHVALCG
TGSPLPSRDRAGACTLLIAGDKMFVVDAGEGGARNIAMMGLPNGKIRALFLTHYHSDHID
GLGPMMLLRWTGSGNAAPLPVYGPEGLEAVIGGFNAAYAADNRYRTAHHGAVITPPQAAG
AVALPFAMPETQRLVYEADGLKVTAFPVDHRPVQPAVGYRFDYKGRSVVISGDTAPSASV
ETAARSADLLIHEALQPEMVEMLSRRLRAAGRSMTGQIMHDILDYHASPTQAADSARRAG
VKMLVLSHIVPPVPSRAFYRAFLGRAAEHFDGPLIIGEDGQFFTLRAGGGTIERGRWL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggccaggcgcgctgcgctcttcgttctgctgaccttggcgcttgccgcagca
gcgctgtggctcctccagcgaccggccggcctttggctcttcgagcggggcgccgccgag
gcggcaggacgcgatccgctggcggacctgcccgacgggctacatgttgcgctctgcgga
accggatcaccgctgcccagccgtgatcgcgccggcgcgtgcaccctcctcatcgcgggc
gacaagatgtttgtggtcgatgcaggagaaggcggggcacgcaacatcgcgatgatgggg
ctgcccaatggcaagatccgcgctctgttcctgacccattatcattcggatcacatcgac
ggcctcggtcccatgatgctgctgcgctggaccgggagcggcaacgccgcgccgcttccc
gtttacggtcccgagggtctcgaagccgtgatcggaggcttcaacgctgcctatgccgcc
gacaatcgctaccgcacagcgcaccatggcgccgtgattactccgccgcaggcggcaggc
gcggtcgccctgcccttcgcaatgccggaaacgcaaaggctcgtctatgaggccgatgga
ctcaaggtcacggcctttcccgtcgaccatcgtccggtacagcccgcggtcggctatcgc
ttcgactacaagggacggtcggtcgtcataagcggggataccgcaccctccgcctcagtc
gaaaccgccgcgaggagcgccgatctcctcatccacgaggcgctgcaacccgaaatggtc
gagatgctgtcccgccggctgagagccgcgggacggtccatgacggggcagatcatgcac
gacattctagactatcacgcaagccccacgcaggcggccgatagcgcccgccgcgcgggc
gtaaaaatgctggtcctcagccacatcgtcccgcccgttccatcgcgcgccttctatcgc
gcgtttctggggcgtgctgccgaacatttcgatgggcctttgattatcggtgaggacggg
caatttttcaccctgcgagcaggaggcgggacaattgagcgcggccgttggttgtag
DBGET
integrated database retrieval system
