Sphingopyxis sp. 113P3: LH20_12405
Help
Entry
LH20_12405 CDS
T04069
Symbol
trpA
Name
(GenBank) tryptophan synthase subunit alpha
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp00260
Glycine, serine and threonine metabolism
sphp00400
Phenylalanine, tyrosine and tryptophan biosynthesis
sphp01100
Metabolic pathways
sphp01110
Biosynthesis of secondary metabolites
sphp01230
Biosynthesis of amino acids
Module
sphp_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LH20_12405 (trpA)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
LH20_12405 (trpA)
Enzymes [BR:
sphp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
LH20_12405 (trpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
BtpA
Motif
Other DBs
NCBI-ProteinID:
ALC12754
UniProt:
A0A0M4CQF8
LinkDB
All DBs
Position
2478168..2478959
Genome browser
AA seq
263 aa
AA seq
DB search
MTRFTAAFSKPHPALVAFITGGDGDTAANLDALVAGGADVIELGMPFTDPMADGPAIQAA
NLRALGKGTTTAELFAIAGAFRERHPHIPLVLMGYANPMTIRGADWFAAECAKAGIDGVI
CVDIPSEEDAELGPALRSAGVDLIRLATPTTDAARLPDVLNGAGGFLYYVSVAGITGLQQ
AAQASIEDAVARLKSATDLPVAVGFGVRTPQQAAAIAKVADGVVVGSALVDIIAEHGEAA
AAPLEAFTRTLADAIHGAKEIAA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcttcacagccgccttttcgaagccgcatcccgcgctcgtcgccttcatcacc
ggcggcgacggcgacaccgccgcaaacctcgatgcgctcgtcgcggggggcgccgatgtg
atcgaactcggcatgcccttcaccgacccgatggccgacggaccagcgatccaggccgcg
aatctgcgcgcgctcggaaaaggcacgacgaccgcagagcttttcgcgatcgcaggggcc
tttcgcgagcgtcacccgcacatcccgctcgtcctcatgggatatgccaatccgatgaca
atccgcggtgccgactggtttgccgccgaatgtgccaaggctggcatcgatggcgtcatc
tgcgtcgacatcccttccgaggaagacgccgaactgggccccgctctgcgaagcgccggg
gttgacctcatccgtcttgccaccccgacgacagacgctgcgcgcttgcccgacgtgctg
aacggcgccggaggcttcctctattacgtctcggttgccggcatcaccgggcttcagcag
gccgcgcaggcgagcatcgaagatgccgttgcgcgtctcaagtctgcgaccgatctccca
gtggcagtcggcttcggcgtccgcacgcctcagcaggccgcggcgatcgcgaaggtcgcc
gacggcgtcgtcgtcggctcggctcttgtcgatatcatcgccgagcatggcgaggccgcc
gcagcgccgctcgaagccttcacccgcaccctcgccgatgctatccacggcgcaaaggag
atcgccgcatga
DBGET
integrated database retrieval system
