Sphingopyxis sp. 113P3: LH20_15550
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Entry
LH20_15550 CDS
T04069
Name
(GenBank) hypothetical protein
KO
K19231
fibronectin-binding autotransporter adhesin
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphp02000
]
LH20_15550
Transporters [BR:
sphp02000
]
Other transporters
Pores ion channels [TC:
1
]
LH20_15550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
DUF5020
Motif
Other DBs
NCBI-ProteinID:
ALC13372
UniProt:
A0A0M4D0L0
LinkDB
All DBs
Position
complement(3141174..3146852)
Genome browser
AA seq
1892 aa
AA seq
DB search
MNRAALCATTALVTAGFVLTVPAGAAELGRFVPAGAPASIDNPADETIEGDRIGVYSRAS
QTTITNAGTIRGNGSADGLDVLPEGGITLDGGPAAIANSGTITGAGHGISTAYFYDSQTQ
ILEGRAVGVAVTNSGTIAGESNDGVRLIGGGSVANSGTITGAGRADADGVSVYAYDDQDL
SDVTAIGTITNAEGGTISGARYGAILFDGGLVENEGLLSGGAGGLWVQGNDPAGNKTASV
TNAGTISGGSGLTFANVLAASDLVNSGTIVGNAAHGVANGSFGRVSIINEAGATIAGATS
GVYDDEGGIDLVNAGTIRGEGSYDGFDAPPDAGVTILGAPSTIVNSGLISGAGAGVTTAY
YFNPATGLVEGRAAGTAVDNSGTIVGESNDGVRLIGGGSVTNSGTITGTGRADADGISMY
AYDDQASEDYSALVTNAADGTIEGDRYGIILSGGGDVDNAGAITGVTGGVYVQGTALNSG
DRGGVTASLVNSGSIRGTGDLGGTDGDGYGVGFGSDMSSATLDNSGSISSDFGAGVAHGS
RAEVTVTNAAGGTITGATSGIYSNATGTLDVINAGTIRGEGAYDGFDAPPDAGITIGTAS
SSVTNSGTISGGGAGITTAYVFDPEIGALLGQAVGTLVTNSGTISGESNDGVRLIGGGTV
TNSGAISGTGRADADGISMYAFEGQASDDYSALVTNAADGTIAGDRFGIILSGGGNVENA
GIIEGSDGGIFIQGTALDSGERSGQTANIVNSGSITASRDDGINGYGVGLGSDLASATLT
NSGTISSAESAGVFHGTLGDVTITNAAGGTIEGGTHGVFAGGDGSLALSNAGTIRGNGIY
EGSEAPADAGVMIQSAGAVVDNSGTISGAGYGIVTQLYFNDETGQIEARATGTEISNSGI
IRGDTNDGIRLFGGGSIVNSGTIEGVAGALTDGVTIQAFAGQDTSGQSMLGSVVNEAGGT
IAGARYGVLAVSGGSVTNAGTISGSETGVVIGRQNSGGKAGELVNSGTISGGVLIDVDSA
AASNSGTILSETGVAFTSLGAITLTNSGTIRGGNGVAVQLSAFDDAVTLRSGSAITGAID
AGAGADSLTLDGDILELTEAQQLGAATGFETLDVAAGYWTTAGVVGEFDQVTIGEGAALQ
VNEADLGDGEGLSSPILTSAVTTNGRLLLNFSENDVVSQLDELSITGTGTIELIGEAVFT
IDTDTVAHTGGTLIANGGLVLTGTLLGDVTTSGDGSFQLGAGGTEGQFAGDIVNDGRFIF
NRSDDYDFLGAFSGSGVLDKMGAGVLIFSGDYNFDGITNILAGSVRIGGLIDPETVFDLG
GGTLDISGNDQTIGGLSGGEGATVQMGENDLTVDQDEDSAFAGTISGTGGFTKEGAGNLN
LTGNSDYTGPTSINGGTLSVNGSIASSPVTVGDGGTLGGNGIVGSTTVAGGGTIAPGNSI
GRLTVAGDLAFAPGSVFEVEVNAAGEADRIDATGAVTIASTASVSVLAEDGAYNPRTDYI
ILTGADGITGTFGSVTSDLAFLDPLLRYGQNSVTLSLYRNDLDFADVAVGANQAGVAAAI
QARGIDDPLFEALLVQNASVAQAAYGDLSGEILAHTLSGLTDDSRHLRSALLGMEAPQES
GAFIWGSAFGGWGDFDAQAGGRGIKTDHKGLVAGFGYGGNGFAAALSAGIGNSDFRADGR
NDRAKADSKYLAAHLAYGTGEGFRGAFGLAYGWHDVDTTRSVVFAPLAQTLKSARDANTF
QIFGEAGYDFVMGKAALTPFARLAHVRTKSDAFAETGGNAALAVAGAKQETTFLSLGARA
RFNIGQPGFQPYASAAWNRASGDRGAPVGAAFASGGGSPFVLTGTLIPKNSAEIEAGFDY
TSGPFRIGAAYSGTLASDRRTHGARVTASFAF
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcgtgcggcgctgtgtgcaacgaccgcgctggtcacggcaggtttcgtgctgacg
gtccccgcgggcgcagcggaactgggccggttcgtccccgcaggcgcgccagcctcgatc
gacaatccggccgacgaaacgatcgaaggcgatcgcatcggcgtttattcgcgcgccagt
caaacgaccatcaccaatgcgggaacgatccggggtaacggcagcgccgatgggctcgat
gtgttgcccgagggcggcatcacgctcgacggtggacccgccgccattgccaacagtggc
acgatcacgggtgcggggcacgggatctccaccgcctatttctatgattcgcagacacaa
atcctcgaggggcgcgcggtcggggtcgccgtgacgaacagcggcacaattgcgggggag
agcaatgacggggtccgcctgatcggcggcggcagcgtagccaacagcgggacgattacg
ggcgccggacgcgccgacgccgacggcgtgtcagtctatgcctatgacgaccaggacttg
tcggatgtcaccgcgatcgggacgatcaccaacgctgagggaggcacgatcagcggcgcg
cgctatggcgcaatcctgttcgacggcggccttgtcgagaatgaagggctcctcagcggc
ggcgccggcggtctctgggtgcagggcaacgacccggctggcaacaagacggcgtcggtg
accaatgccggcacgatttcggggggaagcggcctgacctttgccaatgtgcttgccgcg
tccgaccttgtgaacagcgggaccatcgtcggtaatgcagctcatggcgttgcaaatggc
tcattcggccgcgtgtcgatcatcaacgaggctggcgcgacgatcgccggggcgaccagc
ggcgtctatgacgatgaaggcgggatcgatctcgtcaacgcgggcacgatccgcggcgag
ggtagctatgacggcttcgatgcgcccccggacgccggggtcacgatcctcggcgcgccc
tcgacgatcgtcaacagcggccttatctcgggcgccggcgcgggcgtgacgaccgcttat
tatttcaaccctgcaaccggcctcgttgaaggccgagcagcgggcacggcggtggacaac
agcgggacaatcgtgggcgaaagcaacgacggcgttcgcctgatcggcggcggcagcgtg
accaacagcggcacgatcaccgggacgggccgcgccgatgccgacggcatttcgatgtat
gcctatgacgatcaggcgagcgaggattacagcgcgcttgtcaccaacgcggcggatggg
acgatcgaaggcgatcgctatggcatcatcctgtcggggggcggggacgtcgacaatgcc
ggcgccatcacgggcgtcaccggcggcgtctatgttcagggtaccgcgctcaacagcggc
gatcgcggcggagtgaccgccagtctcgtcaattcgggcagcattcgcggcacgggcgat
ctcggcgggaccgatggtgacggttatggggttggcttcggcagcgacatgtcgagtgcg
accctcgataacagcggctcgatcagcagcgacttcggcgccggcgtggcgcacggatcg
cgcgccgaggtgacggtaacgaacgccgcgggcggcacgattactggcgcgacatcgggc
atctattcgaatgcgaccggcacactcgatgtcatcaatgccggcacgatccggggcgaa
ggcgcctacgacggcttcgatgccccgcccgatgcgggcattaccatcggtacggcatcg
tcgagcgtgacgaacagcggcaccatctcgggcggcggcgctgggatcacgaccgcctat
gtgttcgacccggagattggcgcactgctcggacaagcggtcggcactctcgtgaccaac
agcgggacgatcagcggcgagagcaatgacggcgttcgcctgatcggcggcggcaccgtg
acgaacagcggggccatcagcggcaccgggcgcgccgacgccgacggcatctccatgtac
gcctttgagggccaggcgagcgatgattacagtgcgcttgtcaccaacgcggcggacggc
acgattgcaggggatcgcttcggcatcattctgtcgggcggcggcaacgtcgagaacgca
ggaatcatcgaaggcagcgacggcggtatcttcatccagggcaccgcgctcgatagcggc
gagcggagcgggcagaccgcgaacatcgtcaattcgggcagcatcacggcgagccgcgat
gacgggatcaacggatacggcgtcggtctcggcagtgatcttgccagcgcaacgctgacc
aacagcgggacgatcagctcggctgagagcgccggcgtgtttcacgggacgctcggcgac
gtgacgatcaccaatgcagcgggcggcacaatcgaggggggaactcacggcgtctttgcg
ggcggcgatgggagccttgccttgtccaacgcgggcacgatccgcggcaacggcatctat
gaaggcagcgaagcgccggccgatgccggcgtgatgatccagtcggcgggcgcggtggtt
gacaatagcggcaccatttcgggcgctggctacggcatcgtgactcagctttacttcaac
gacgaaacgggccagatcgaagcgcgcgcgacgggcacggaaatctccaacagcgggatc
atccgcggcgacaccaacgacggcatccgcctgttcggcgggggctcgatcgtcaacagc
gggaccatcgagggcgtcgcaggcgctctcaccgacggcgtgacgatccaggctttcgcg
ggccaggataccagcggccaatcgatgctcggcagcgtcgtcaacgaggccggcggaacg
atagccggtgcgcgttacggcgtgctcgcggtcagcggcggctcggtcaccaacgccgga
acgatctcgggcagcgagaccggcgtcgtcattggccgccagaacagcggcggcaaggcg
ggcgaactggtgaacagcggcacgatcagcggcggtgtgctgatcgacgtcgacagcgcg
gcggcgagcaacagcggtacaatcctcagcgagaccggcgtcgctttcacctcgctcggt
gcgataacgctgacgaacagcggcacgatcagaggcgggaacggcgttgccgttcagctc
agcgccttcgacgatgccgtcacgcttcggagcggcagtgcgatcaccggcgcgatcgat
gcgggcgcaggtgccgacagcctcacgctcgatggcgatattctcgaactcactgaggcg
cagcagctcggcgccgcgacgggctttgaaacgctcgatgttgcggccggctattggacg
accgcgggggtggtcggcgaattcgaccaggtcacgatcggcgagggcgccgcgctccag
gtcaacgaggccgatctcggtgacggcgaggggctgtcctcgccgatcctcacttcggcg
gtgacgaccaacggccggctgctgctcaacttcagcgagaatgatgtggtttcacagctc
gacgagctgtcgatcaccggcacggggacgatcgaactgatcggcgaggcggtcttcacc
atcgacaccgacacggtcgcgcacaccggcggcacgctgattgcaaacggcggtcttgtg
ctcaccggaactctcctcggcgacgtgaccacgtcgggggacggcagcttccagctcggc
gcggggggaaccgaaggccagtttgcgggcgatatcgtcaacgacggacgcttcatcttc
aaccgctcggatgattatgatttcctcggcgccttttcgggcagcggtgtcctcgacaag
atgggggcgggcgtcctgatcttcagcggcgactataatttcgatggcatcaccaacatc
ctcgcgggctcggtccgcatcggcggcctgatcgatccggaaacggtcttcgatctcggt
gggggtacgctcgacatttcgggcaacgatcagacgatcggcggcctttcgggcggagag
ggcgcaacggttcagatgggcgagaatgatctcaccgtcgaccaggacgaagatagcgcc
tttgccgggacgatctcgggcaccggcggcttcaccaaggagggcgccggcaacctcaac
ctcactggcaacagcgattatacgggcccgacttcgatcaacgggggcaccctctcggtc
aacggctcgatcgcttcctcgccggtgaccgtgggcgacggcggcacgctcggcggcaat
ggcatcgtcggttcgacgacggtcgcgggagggggtaccattgcgcccggcaattcgatc
ggtcgcctcacagtcgcaggcgatctcgccttcgctcccggctcggtcttcgaagtcgag
gtcaatgccgcgggcgaggcggaccggatcgacgcgacgggcgcggtcaccatcgcgagc
acggcgagcgtgtcggtgctcgcagaggatggcgcctataatccgcgaaccgattacatc
atcctgaccggagcggatggcatcaccggaaccttcgggtcggtgacgagcgaccttgcg
ttccttgatccgctgctgcgctatggtcagaacagcgtgacgctttcgctttatcgcaac
gacttggattttgccgatgtcgcggtcggcgccaaccaggcgggggtcgcggccgcaatc
caggcgcgcggcatcgacgatccgctgttcgaggcgctgctggtccagaatgcgtcagtt
gctcaagcggcctatggcgacctgtcgggcgagattctcgcgcacacgctgagcggcctc
actgacgacagccgccacctgcgcagcgcgctgctcggcatggaagcgccacaggaaagc
ggcgccttcatatggggctcagcgttcggtggctggggcgacttcgacgcgcaggccggc
ggccgcggcatcaagaccgaccataaggggctcgttgcaggcttcggctacggcggcaac
ggatttgccgccgcgctctcggccgggatcggcaattcggacttccgcgccgacgggcgg
aatgaccgggccaaggccgacagcaagtatctggcagcgcaccttgcctatggaacagga
gagggcttccgcggtgctttcggccttgcctatggctggcacgacgtcgacaccacgcgt
tcggtggtctttgcgccgcttgcacagacgctgaagtcggcgcgcgacgcgaacacgttc
cagatcttcggcgaggcgggctatgacttcgtcatgggcaaggcggcgttgacgcccttt
gcccggctcgcccatgttcgcaccaagagcgatgccttcgccgaaaccggcggcaacgcg
gcgctcgcggtcgctggagccaagcaggaaaccactttcctcagcctcggcgcgcgcgcc
cgcttcaatatcggacagccaggcttccagccctatgcttcggctgcctggaatcgcgcc
tcgggtgatcgtggagcgcccgtgggggcggcgtttgcgagtggcggcggttcgcccttc
gtgctgaccggcacgctgattccgaagaactcggccgagatcgaagctggcttcgattac
acgagcggccctttccggatcggcgccgcctacagcggcacgctggcgtcggaccgccgc
acgcacggggcgcgtgtgaccgcgagctttgccttctga
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