Sphingopyxis sp. 113P3: LH20_15645
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Entry
LH20_15645 CDS
T04069
Name
(GenBank) hypothetical protein
KO
K14201
clumping factor A
Organism
sphp
Sphingopyxis sp. 113P3
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Big_6
BapA_N
YphG_2nd
Cadherin_4
Big_9
Y_Y_Y
DUF2118
Motif
Other DBs
NCBI-ProteinID:
ALC13391
LinkDB
All DBs
Position
complement(3166728..3170891)
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AA seq
1387 aa
AA seq
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MATAAAAEIFDKATGTSQSVSIDSIDLDAPSVVRLQLSRADVRDLEREGNDLLVHLRSGE
VIRVVDFYVTSAEGEASDLVIQEPDASMWLARPGTGPQFHELVDWGELVPGSSIAAETGG
AGSGAGAVLPILGALGGAGMIGIAASGGDDSDADADADADADADADADADADADADADAD
ADADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD
ADADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD
ADADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD
ADADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD
ADADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD
ADADADADADADVDPPAPPTADVDDATGTLVTGSGEPNATVTVYGPGGTTVLGTGTVQPD
GNYSVTVPAQINGEELSVTLTDAAGNESLPTPTTAPDLTPPAAPTADIDDASGTVVSGIG
EPNASVTVYGADGATVLGTGTVQPDGDYSVTIPAQTNGEDLTVTLTDAAGNESLPASTTA
PDLTPPAAPTADIDEATGTTVTGAGESNATVTVYGPDGTTVLGTGTVQPDGNYSVTIPAQ
TNGEELTVTLTDAAGNESGTSSVTAPDFFDAFDNLGSAGIDLVPVSTPVDLGSANYLLLL
SLAAIDPQLDLAGLQLLGVEPVSFTVEAGHTLDATFEYGGLLDIGAVADYQVVVQKLVEG
QWVGIDGDGQSTLLSLGLLDGNITGSANLDAGEYRAFVTFGGLAGVGVLGSLHVSGTDLD
YTDIANVLAVTAEGNMIIDANGAGEIDMVPAGTTVHSVTVNGVTTVITADGTVVAGEHGT
LVVDLDGSYVYTPDADPANIGAAESFVYTLEAPGGALESATLVIEIGSPDVSLIWGAPGD
PATTGLTATDDVATASVVYENAVETVSTPLFTLSNGIGLIIPNVDTDTANFTVAADTLSD
ARVLIDASDGLALAVLPSYTVTLRDGDGNVVGTPVTVQALANLLGLGAGAVVDFADLPPG
DYSIEVSSTNTLGLGYDSIVSLTQEITDLTAFEVGTATGADGNLLENDVTGSSFTSVLVD
SGSGFAEIGDVPVTLIGAFGTLTVDETGHYHYEPDPDLAHFTTDQVDSFSYQIRHPNGEV
VEAQLDVTITVSDPGGSVLMASLLSAETGDTVPLDGFDPATSTGEGRAAGPDFVFDLFEG
QGDLVDVLEGYLGREPDRGSDRDTPFEGADNGDTSESDQNILPVEDPLAFLSSSPDDDLG
HNNHTLI
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcagcggctgcggaaatattcgacaaggcaactggtacatcgcagtctgtc
tccattgactccatcgacctcgatgcgccgagcgttgtgcgtctccaattgagccgcgct
gacgtgcgggacctggaacgcgagggcaacgacctactggttcatttgcggtcgggtgaa
gtaattcgggttgttgatttctatgtaacctcggctgaaggggaggcgagcgacctcgtc
atccaagagcccgatgcgagcatgtggctcgcccggcccggcacgggcccccagtttcat
gagctagtagactggggagaattggtccccgggtcctctatcgcagcggagacggggggt
gctggctcgggggctggcgcggtgttgcccattttgggtgcgctcggcggtgccgggatg
atcggcattgccgccagcgggggcgatgattctgacgccgacgccgacgccgacgcggat
gctgatgcagatgccgacgctgacgcagatgccgatgctgatgcggacgcagatgccgat
gcggacgcagatgctgacgccgatgcggatgccgacgccgacgccgacgccgatgcggat
gcagacgctgatgcggatgcagacgccgacgcggatgctgatgctgatgctgatgctgat
gcggatgcggatgcagacgccgacgcggacgctgatgccgatgcggacgctgatgccgat
gcggatgctgacgccgatgcggatgccgacgccgacgccgatgcggatgcggatgcggat
gcagacgcggacgcagatgccgatgcagacgccgacgcggatgcggacgctgatgccgat
gcggatgctgacgccgatgccgatgcggatgccgatgcagacgccgacgcggatgcggac
gctgatgccgatgcggatgctgacgccgatgcggatgccgacgccgacgccgacgccgac
gccgacgcggacgctgacgcggatgctgatgctgatgcggatgccgatgcggacgctgat
gccgacgctgacgcagatgccgatgcggacgcagatgctgatgcggatgctgatgcagac
gccgacgcggatgcggatgcggatgcggatgcagacgcggacgcagatgccgatgctgac
gcagacgcggatgctgatgcggatgccgatgcagacgcggatgctgatgcggatgctgat
gcggatgcggatgcggatgcagacgcggacgcagatgccgatgcggacgcagatgctgat
gcggatgcggatgctgatgctgatgctgatgcagacgcggatgcggatgcagacgcggac
gcagatgccgatgccgacgcagatgccgatgccgatgccgacgctgacgccgatgcggat
gccgacgccgacgccgatgcggacgcagatgctgatgcggatgccgacgccgacgccgac
gccgacgcggatgctgatgcagacgcggatgctgacgtcgatccgccggcaccgccaact
gcggacgtcgacgacgcgacgggtaccctggtcaccggatccggcgagcccaatgcgact
gtgacggtatacgggccgggcggaacgactgttctggggacgggaacggtgcaacccgat
ggcaattacagcgtcacggttcccgcccagatcaacggtgaggagctcagcgtcacgctc
acggatgccgcaggcaatgagtccctgcccacaccgacgactgcgcctgacctgacaccg
ccggcggcaccgaccgcggacatagatgacgcgtccggcacggtcgtgagcggcatcggc
gagccgaacgcatccgttacggtctacggggctgacggagccacagtcctcggaactggc
acggtgcaacctgacggcgattacagcgtcaccatcccagcgcagaccaatggcgaggac
ctgaccgtcacgctcaccgacgcggcaggaaatgagtccttgccggcctcaacgactgcg
cccgaccttacaccgccggcggcgcccacggccgacatcgatgaagccaccgggaccact
gtcaccggtgccggcgaatccaatgccacggtgacggtttatggtccggacggaacgacg
gttctcgggacgggcacggtccaacccgatggcaactacagcgtcacaatcccggcgcag
accaatggcgaggaactgactgttacgcttaccgacgccgccggaaacgaatccggaacc
tcgagcgtgacggctcccgacttcttcgatgcattcgataacctgggtagcgccgggatc
gatcttgtgccggtctccacgcccgttgatctgggcagcgccaattatctgctgctgttg
tcgctggccgcgattgatccgcagctcgatcttgcgggtcttcagttgctcggtgtcgag
ccggtatccttcaccgtcgaggcgggtcacacgctggacgccaccttcgaatatgggggg
ctgctcgatatcggcgctgtcgctgactatcaggttgtggttcagaagctcgtcgagggg
caatgggtcggaatcgatggcgatggccagtccaccctcctctctcttggcctattggac
gggaacatcacgggcagtgccaacctcgatgccggcgaatatcgggccttcgtcaccttc
ggtggcctggccggggtcggcgtactgggttcgctccacgtgagcggcaccgacctcgat
tacaccgatattgccaatgtcctcgctgtcaccgccgaaggcaatatgatcatcgacgcc
aatggtgccggtgaaatcgatatggttccggcggggacgacggtacacagcgtcacagtc
aatggcgttaccaccgtgatcaccgccgacggaacggtcgttgccggcgagcatggcacg
ctggtcgtcgatctcgatggcagctatgtctacacgcccgatgccgatcccgcgaatatc
ggggcggctgaaagcttcgtctacaccctcgaggcgccgggcggtgcgctagaaagcgcg
acccttgtgatcgagatcggcagccccgatgtcagcctcatatggggcgcgccgggcgat
cccgctaccaccggcctcacggcgaccgatgacgtggcaaccgcgtcggtggtttatgag
aatgcggtcgagaccgtttccacgccgctcttcaccctgagcaacggcatcggcctcatt
attccgaacgtcgataccgacaccgcgaatttcaccgtcgcggccgataccctgtccgat
gctcgggtcctgattgacgcctccgatggcctcgcgctcgcggttctgccaagctacacg
gtcacgctgcgcgatggagacggcaatgtcgtgggtaccccggtgacggtccaagcgctc
gccaatctcctcggcctcggcgcgggcgctgtggtcgacttcgcggacctgccgccgggc
gattacagtatcgaagtatcgagtaccaatacgctcggtcttggatatgactcgatcgtg
tcgctgacgcaggagataaccgatctcaccgcgttcgaggtcggaacggcgaccggtgct
gacggcaatctgctcgaaaacgacgtcaccggatcgtccttcacatcggtgctcgtcgac
agtggcagcggctttgcagaaatcggagatgttccggtgacactgatcggagctttcggg
acgctcacggtggatgagaccggccattatcattatgagcccgatcccgatctggcgcac
ttcaccaccgaccaggtggacagcttcagctaccagatccgtcaccccaacggcgaggtc
gtcgaggcccagctcgacgtgacgatcacagtcagcgatcccggcgggtcggtccttatg
gcgtcgctcctgtcggccgagaccggcgacacggtcccgctcgatggatttgatcccgcg
acgtcgaccggtgagggacgggcagctggccccgacttcgtcttcgatctcttcgaagga
cagggcgatcttgtcgatgtgctcgagggttatcttggtcgcgaacccgaccgcgggtcc
gacagggatacgcccttcgagggcgctgacaacggcgatacatccgaatcggatcaaaat
attttgcccgtcgaggatccgctagctttcctgtcatccagtcccgatgacgatctcggc
cacaataatcatacgttaatctaa
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