Sphingopyxis sp. 113P3: LH20_16065
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Entry
LH20_16065 CDS
T04069
Name
(GenBank) cyclic nucleotide-binding protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp02020
Two-component system
sphp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LH20_16065
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH20_16065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphp03000
]
LH20_16065
Transcription factors [BR:
sphp03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
LH20_16065
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
DUF5338
TgpA_N
Motif
Other DBs
NCBI-ProteinID:
ALC13474
LinkDB
All DBs
Position
complement(3252883..3253557)
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AA seq
224 aa
AA seq
DB search
MANFSPALFGYGALLLLLATCLATRTEQVRLGIACAALLALPAAVIHSQVGYALLLLAIL
VVNGVLAARSWLHDAAIRFSPEEQALRALHLADLGAVSVRRLIDQGHWITAKRGEVLIRE
NHAAPSLFYLAEGRALIQRDGAEVGTLTDGALIGEATVLDGAHATGTVTLTTNARLWFVP
AAALRAYLAANPDIAAGLHQGFARALRGKLASANTRIADMPPLS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttcagccccgccttgttcgggtatggcgccctgttgttgctgctggcaacg
tgccttgccacgcgcacggaacaagtgcgtctcggcatcgcctgtgcggcgctgctcgcg
ctgcccgctgccgtcatccactcgcaggtcggctatgcgctgctgctgctggcaattctt
gttgtgaacggcgtccttgcagcgcgcagctggctgcatgatgccgcgatccgtttctcg
cccgaggagcaggcccttcgtgccttgcaccttgccgaccttggcgccgtcagcgtccgg
cgtctcatcgaccagggccactggatcacggcaaagcgcggcgaggtgcttattcgcgag
aatcacgcagcgcccagtctcttctaccttgccgagggccgcgcgctgatccagcgcgac
ggggccgaggtggggacgctgaccgacggcgcgctgatcggcgaggcgacagtcctcgat
ggcgcccacgcgacaggaacggtgacgctgaccaccaatgcgcggctgtggttcgttcct
gcagcggcgctgcgcgcctatcttgccgcaaatcccgacattgcagcggggctccatcag
ggattcgcgagggcgctgcgcggcaagctcgcgagcgccaacacgcgcattgccgacatg
cccccgctctcctaa
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