Sphingopyxis sp. 113P3: LH20_16820
Help
Entry
LH20_16820 CDS
T04069
Name
(GenBank) nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphp03019
]
LH20_16820
Messenger RNA biogenesis [BR:
sphp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LH20_16820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_22
AAA_16
AAA_33
AAA_18
Rad17
Zeta_toxin
AAA_29
AAA_27
ABC_tran
AAA_30
Integrase_1
nSTAND_NTPase5
AAA_28
Aq_aa27
CoaE
Motif
Other DBs
NCBI-ProteinID:
ALC13624
LinkDB
All DBs
Position
3414470..3415408
Genome browser
AA seq
312 aa
AA seq
DB search
MTGTVPAAEPRLLLVTGLSGAGKSTVLRVLEDLGWEVVDNLPLSLLEPLIEAPVKPSEAA
RPIAVGIDSRSRGFKPARLVKRIKELREAGGRDIQTLFLDCAGAELERRFSETRRRHPLA
EDRPAADGIAREREMMESLRRWAEHVVDTTNYSSNDLQQEIRQRFADTGGDEPSLTVMSF
GFARGLPRNADLVFDMRYLRNPHWDPKLRPGTGLDADVSAYVAADPAYETTVAQIETLLL
TLLPRYRAEGKSYVTIAFGCTGGRHRSVHVAERVAGTLRAAGHAPNLLHRNLDSAPQDGL
EGKPPPASGGKA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtaccgttcctgccgccgagccgcgcctccttctcgttaccggcctgtcgggc
gcaggcaagtcgaccgttctcagggtgcttgaggatctggggtgggaggttgtcgacaat
ctgccgctgtcgctgctcgagccgttgatcgaagctcccgtcaaacccagcgaggcagcg
cggccgatcgcggttggtatcgacagccggagccgcggcttcaagcctgcgcgactcgtc
aaacggatcaaggaattgcgcgaggcgggcgggcgcgacatccagacgctgtttctcgac
tgcgccggcgccgaactcgaacgccgcttctccgagacgcggcgccgccatccgctcgcc
gaagaccgtcccgctgccgacggcatcgcgcgcgagcgcgagatgatggaatccctccgc
cgctgggccgagcatgtcgtcgacacgaccaattacagcagcaatgatctgcagcaggaa
atccgccagcgcttcgccgatacaggcggcgacgagccgtcgctgaccgtgatgagcttc
ggtttcgcccgcggacttccgcgcaatgccgacctagtgttcgacatgcgctatctgcgc
aatccgcactgggatccgaagttgcggcccggcaccggtctcgatgccgacgtctccgcc
tatgtcgctgccgaccccgcctatgagaccacggttgcccagatcgagaccttgttgctc
accttgctgccgcgctatcgtgccgaagggaaaagctatgtcacgattgcttttggctgc
accggcgggcggcaccggtccgtgcatgtcgccgagcgcgtcgccgggacgctgcgcgct
gccggccacgctccaaatctcctccatcgcaaccttgactcggccccgcaagatgggctt
gagggcaagcccccgcccgcgtccggcggtaaagcataa
DBGET
integrated database retrieval system
