Sphingopyxis sp. 113P3: LH20_16860
Help
Entry
LH20_16860 CDS
T04069
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LH20_16860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphp03400
]
LH20_16860
Enzymes [BR:
sphp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LH20_16860
DNA repair and recombination proteins [BR:
sphp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LH20_16860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
PriA_CRR
Helicase_C
ETF
AAA_30
zinc-ribbons_6
AAA_16
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALC13632
UniProt:
A0A0M4DCD2
LinkDB
All DBs
Position
3422994..3425162
Genome browser
AA seq
722 aa
AA seq
DB search
MTRARVLLLTAALGPLDYRVPEGSDVPLGSVVVAPLGPRRMGGVVWEDESFGAPEPVGDN
RLRNLYEIVSVPPVPAPLRRLVEWTSDYYLAPPGSVLRMVLPGAAFADARRPIVEYRATG
ELPARMTPQRTVALEKIGTRQGLVRELAALADVSEAVIRGLVQAGALEAVSVSADAPYPE
PDPGFGPPDLSAEQAAAAGQLRDAVAAAAFETLLLDGVTGSGKTEVYMEAIAAAVEAGKQ
ALVLLPEIALTEPMLTRFAARFGCEPVAWHSGLRSTERRRAWHAISRGEAKIVVGARSAL
FLPYARLGLIVVDEAHETSFKQEDGVHYHARDVAVMRGHFEALPVILASATPALESLAQV
EAGRYRHIILPARYGGATLPDLAAIDMRQDPPDRGNWLAPPLVEALADRLHKGEQSLLFL
NRRGFAPLTLCRTCGHRIQCPNCTAWMVEHRLVHRLACHHCGHVMPPPRLCPECEDEDSL
VACGPGVERVADEVALRFPEARTAIVTSDTLWSPAKAAEFVANVEGGLVDIIIGTQLVTK
GYHFPNLTLVGVVDADLGLDGGDLRASERTFQQIAQVAGRAGRGVKPGEVLIQTRVPDAP
VMAALVANDREGFYAAEAASRRQAGAPPYGRFAALVISSEDIDVARGVAQRLGQKAPVAD
GLAIYGPAPAPLAMLRGRHRFRLLLHAPRSFDLQGAIRDWVARIDWPAKARLAIDVDPYS
FV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgcccgcgttctccttctcaccgccgccctcgggccgcttgactatcgcgtc
cccgaagggagcgatgtgccgctcggcagcgtcgtcgtcgcgccgctcgggccgcggcgg
atgggaggcgtggtctgggaagatgaaagcttcggcgcgcccgaaccggtcggcgacaat
cgtctgcgcaacctctacgagattgtgtccgtccccccggtgcccgcgcccctgcggcgg
ctcgttgaatggacgagcgactattatctcgccccgcccgggtcggtcctgcgcatggtc
ttgcccggcgccgcctttgccgacgcgcggcgcccgatcgtcgagtatcgcgcgaccggc
gagctgcctgcgcgcatgacgccgcagcgcactgttgcgctcgaaaagatcggcacgcgg
caagggctcgtgcgcgaactcgcagcgcttgccgacgtcagcgaggccgtgatccgcggg
ctggtacaggcgggcgcgctcgaagcggttagcgtgtcagccgacgcgccctatcccgag
cccgaccccggctttgggccgcccgacctttccgccgaacaggccgcggctgcgggccag
cttcgcgacgccgtggccgctgcggccttcgagaccctgcttctcgatggggtcaccggg
tctggcaagaccgaggtctatatggaagcgatcgccgccgcggtcgaagcgggcaagcag
gcgctcgtccttctccccgagattgccctgaccgagccgatgctgacgcgatttgccgcg
cgattcggctgcgagcctgtcgcctggcactccggactgcgctcgaccgaacgccgccgc
gcgtggcacgccatatctcgcggcgaggcgaaaatcgtggtcggggcccgctcggcactc
ttccttccctacgcccgcctcggcctgatcgtcgtcgacgaggcgcatgagacgagcttc
aagcaggaggatggcgttcattatcatgcgcgcgacgtcgccgtgatgcgcggacatttt
gaggcgctgccggtgatccttgcgagcgccacccccgcgctcgagagcctcgcgcaggtc
gaggcggggcgctatcgccacatcatcctgcccgcgcgctacggcggcgcgacgctgccc
gaccttgcggccatcgacatgcggcaagacccgcccgaccgcggcaactggctcgctccg
ccgctcgtcgaggctctcgccgaccggctccacaagggcgaacaaagcctcctgtttctc
aatcgccgcggctttgcgccgctcacactttgccggacctgcgggcaccgcatccagtgc
ccgaactgcaccgcctggatggtcgagcatcgcctcgttcaccgcctcgcctgccaccac
tgcggacatgtgatgccgcccccgcggctgtgtcccgagtgtgaggacgaggacagtctg
gtcgcctgcggccccggggtcgagcgcgtcgccgacgaggtggcgctgcgctttcccgag
gcgcgcaccgcgatcgtcacgtcggacacgctctggtcgcccgccaaggctgcagagttt
gtggccaatgtcgagggcggactggtcgacatcatcatcggcacgcagcttgtcaccaag
ggctatcatttccccaatctgacgctcgtcggggtggtcgatgccgacctggggctcgac
ggcggcgaccttcgcgcctccgagcgaacctttcagcagatcgcgcaggtcgcggggcgc
gctgggcgcggggtcaagcccggcgaggtgctgatccagacccgcgtgcccgacgcgccc
gtcatggcagcgctcgtcgccaacgatcgcgaaggtttctatgccgccgaggcagcctcc
cgccggcaggcaggagcgccgccctatggccgttttgctgcgctcgtcatctcttcggaa
gatatcgatgtcgcgcgcggcgtcgcgcagcgtctcgggcagaaagcgccggtcgccgac
ggtctcgccatctatggcccagcccccgccccgctcgccatgctccgcgggcgccaccgc
ttccgcctcctgctccacgccccgcgcagcttcgacctgcaaggggcgatccgcgactgg
gtagcgcgcatcgactggcccgcaaaggcgcggctggcaatcgacgtcgacccttacagc
ttcgtttga
DBGET
integrated database retrieval system
