Sphingopyxis sp. 113P3: LH20_17400
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Entry
LH20_17400 CDS
T04069
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphp02000
]
LH20_17400
Transporters [BR:
sphp02000
]
Other transporters
Pores ion channels [TC:
1
]
LH20_17400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ALC13739
LinkDB
All DBs
Position
complement(3538439..3540664)
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AA seq
741 aa
AA seq
DB search
MTNLHFAARRAAPVARASAGATAFKTRLARDIAAPAFVAALACCPLSPAFAQDGIVLPEV
DVDSASEAPSTGSGERISSSRLRNLQAGSSDTAAILQSVPGVSGFGAGGFSTLPVIRGLE
AQRLTVLVDGVAIASACPNDMNPPLSYTDPQTVGAIDVITGVSPVSYGGDSIGGIIRVES
APPRFAKQGDTLLTGEISAFYRSNGDGFGGSLSMTAASDKMSLTYNGSYTQADNFKGGGS
LGIVRSSEYAKTDHSLSLVAQVGSGLVELKGGYHFAPYEGFPNQYMDMTSNKSWFLNGHY
AGVFDWGNLDVRASWRDTDHAMNFLADKGGTATGGMPMNTEVHSAGYAVQAEILLGGAGT
LRLGNEFQHQWLNDFWPPVAGNMMMGPNAFINVNGGKRDRLGTFLEWEKSWDRGFTLVAG
IRNDQVWMNTGTVAPYGTGMMQMADVMAAAAFNAADRKRHDSNWSGTLLARYALSPHAEI
EFGYARKVRSPNIYERYSWGRGGMASRMIGWFGDGNGYVGNLALRPEKADTLSAALSVHG
GGKDGWSLKIAPYFTHVDDYIDAVKLADFTDTAGRPTAFDQLQFANQKAEIYGIDLSAAV
PLWSSSSAGSARLTARASWLHGENLADHGPLYHQMPFNAALGLEHRIGGLETRIDLTVVG
EKDRVDPTRNEPRTGSYALLDVQLAYRIDNVRLTLGADNLFDAAYYAPLGGMSLGDLKAT
GVLRPVPGRGRSVNAGVTISF
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatttgcattttgccgcgcggcgcgcggcacctgtggcgcgtgcttctgccggc
gctaccgctttcaagacccgcctggcacgcgatattgctgcccccgccttcgtcgcagcg
ctggcctgctgcccgctctcgccggcctttgcacaggatggcattgtgctgccggaggtc
gatgtggactcggccagcgaagcgccgtcgacgggatcgggcgaaaggatctcctcatct
cgcctccgcaaccttcaggccggctcgagtgatactgccgccattcttcaaagcgtgcca
ggtgtcagcggcttcggcgccgggggcttttcgaccctgccggtgatccgcggcttggag
gcgcagcgcctgaccgtgctcgtcgacggcgtggcgatcgcctcggcctgcccgaacgat
atgaatccgcccctgtcctataccgatccgcagaccgtgggtgcgatcgacgtcattacg
ggcgtctcgccggtcagctatggcggcgacagcatcggcgggatcatccgcgtcgagagc
gctccgccccgcttcgcgaaacagggcgatacgctgctgacaggtgaaatctcggccttc
tatcgcagcaatggcgatggcttcggcggttcgctttcaatgacggccgcgagcgacaag
atgagcctgacctataatggctcctatacccaggccgacaatttcaagggcggtggatcg
ctgggcatcgtgcgatcgagcgaatatgcaaagaccgatcacagcctgagcctggtcgcg
caggtcggcagcggcttggtcgagctgaagggcggctatcatttcgcgccctacgagggg
tttcccaaccaatatatggacatgacgtccaacaagtcctggttcctgaacgggcactat
gcaggcgtcttcgattggggcaatctcgatgtgcgggcgagttggcgcgacaccgaccat
gccatgaactttctcgccgataagggtgggacggctactggcggaatgccgatgaacacc
gaagtccatagcgccggatacgcggtccaggccgaaatcctgctgggcggtgccggaacg
ctgcgtctcggcaatgaattccaacaccagtggctcaacgatttctggccgcccgtcgcg
ggaaacatgatgatggggccgaatgctttcatcaacgtcaacggggggaagcgcgatcgt
ctcggcacattcctcgaatgggaaaagagctgggatcgcgggttcacgctggtcgccggc
atccgcaacgatcaggtctggatgaatacggggacggtcgcgccctacggcaccggaatg
atgcagatggccgacgtgatggcggccgccgcgttcaatgcagccgaccgcaagcggcac
gatagcaattggagcggcacgttgcttgctcgatatgcgctgtcgcctcatgcggaaatc
gagttcggctatgcccggaaggtgcgttcgccgaatatctacgaacggtatagctggggc
cgcggcggcatggcgagccggatgatcgggtggttcggggacgggaatggctatgtcggc
aacctcgcgcttcgcccggaaaaggcggatacgctgagcgccgctctgtcggttcatggc
ggcggcaaggatggctggtcgctgaagatcgcgccttatttcactcatgttgacgactat
atcgacgccgtgaagctggcggactttaccgacacggcgggcagaccgaccgctttcgat
caattgcaattcgccaaccagaaggcggagatttatggcatcgacctgtcggccgccgtc
ccgctctggtcgtcctcatcggcaggaagcgcacgactgaccgcgcgcgcgagctggttg
catggcgagaacctggcggaccatggaccgctctatcaccagatgccgttcaacgcggcg
ctggggctggaacataggatcggcggactggaaacccggattgacctgaccgtcgtcggc
gagaaggatcgtgtcgatccgacccgcaatgaaccgcgaacgggaagctatgcgctgctt
gacgtccagttggcctatcgcatcgacaatgtgcgattgacgctcggcgcggacaatctg
ttcgacgcggcctattatgctccgctcggcgggatgtcgctcggggatctgaaggcgacc
ggcgttcttcgcccggtcccgggccgggggcggtcggtcaacgcaggcgtcacgatctcg
ttctga
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