Sphingopyxis sp. 113P3: LH20_17495
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Entry
LH20_17495 CDS
T04069
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
sphp
Sphingopyxis sp. 113P3
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphp03009
]
LH20_17495
Enzymes [BR:
sphp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
LH20_17495
Ribosome biogenesis [BR:
sphp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LH20_17495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ALC13758
UniProt:
A0A0M4CWP2
LinkDB
All DBs
Position
3561600..3562148
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AA seq
182 aa
AA seq
DB search
MSRLILFNKPYGVLSQFTDRGSETTRATLSDYIDVAGVYPAGRLDRDSEGLLILTDDGAL
QARISSPRHKMPKTYLAQVEGEPDDTALAALRAGIMLNDGPTRPAAVRRIDPPPLWDRDP
PVRYRKSVADSWIELTITEGRNRQIRRMTAAVGFPTLRLVRWRIGGWEIGDLTLGEWREV
TR
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgtctcatcctcttcaacaagccctacggcgtcctgtcccagttcacggaccgc
ggcagcgagactacgcgcgcaacgctgtccgactatattgacgtcgcgggcgtctatccc
gccgggcggctcgatcgcgacagcgaggggctcttgatcctgaccgacgacggcgcgctc
caggcccgcatttcgtctccgcggcacaagatgccaaagacctatcttgcgcaggtcgag
ggcgagcccgatgataccgcgctcgctgcgcttcgcgcagggattatgctcaacgacggt
ccgacccgtcccgcggctgtccggcgcatcgatccgccgccgctttgggaccgcgacccg
ccggtgcgatatcgcaagagcgtagccgattcatggatcgagctcaccatcaccgaaggc
agaaaccgccagatacgccgcatgaccgccgccgtgggatttccaacactgcggctggta
cggtggcgtatagggggatgggagattggtgatctcacgctaggagaatggcgcgaggtc
acgcgctag
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