Sphingopyxis sp. 113P3: LH20_17815
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Entry
LH20_17815 CDS
T04069
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
sphp
Sphingopyxis sp. 113P3
Pathway
sphp00270
Cysteine and methionine metabolism
sphp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sphp00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LH20_17815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphp03000
]
LH20_17815
03032 DNA replication proteins [BR:
sphp03032
]
LH20_17815
03036 Chromosome and associated proteins [BR:
sphp03036
]
LH20_17815
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sphp02048
]
LH20_17815
Enzymes [BR:
sphp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
LH20_17815
Transcription factors [BR:
sphp03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
LH20_17815
DNA replication proteins [BR:
sphp03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
LH20_17815
Chromosome and associated proteins [BR:
sphp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
LH20_17815
Prokaryotic defense system [BR:
sphp02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
LH20_17815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
ALC13817
UniProt:
A0A0M4D4J9
LinkDB
All DBs
Position
3607431..3609260
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AA seq
609 aa
AA seq
DB search
MKLHPLFIDGFAGGGGASTGIGQALGRDVDIAINHSPTAIAIHKANHPDTEHHCTDIRSP
FLPRTATRGRPVGGAWFSPDCKEYSKAKGGPVKDRSIRALCWEVIHWLEETLPAVGYLEN
VEEFEYAAPLDGNGVPMPDKKGREFKRFVRSIRRLGYRVQWRVLRACDYGAPTSRKRLYM
IFRRDGNAIVWPKPTHAAPTDRRVIAGMLLPYRTAAECIDWTIDCPSIFERDRELAEATK
RRIAHGVMRYVVLAERPYIVGRDGTRWKPTGAPHITKFRGGAVGSDMTQPMPTVTANGVP
ARPAGATPLGLVDTVIAPLISYGQQGGLNRPIDKPMHAVTASKKDTNGVVGATLVKMGNG
ERDGQAPRALDPRKPYGTVTAKGSQAAAVTAFLSSFYGSDKAAAGGDPELPLRTARAGGQ
HHAVVAAHIEQANTGMVGHTPRKPLSTIVGKGCTQRIVETTMIEEGALPPEMMARAVRTA
AFLVKYYGTDGENETAQIQPVDRPLDVVTVKARFAVVTVTIDATTYVIVDIGLRMLKPRE
LARAQGFPDDYVLDPVVRKFVRGKWVEKRLTIAEQISAIGNSVCPPVARALVSANQPDLC
NWQPEALAA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacaccctcttttcattgacggtttcgcgggcggaggcggtgccagcaccggc
atcggccaagcgctcggtcgggatgtcgacatcgcgatcaatcacagcccgaccgcgatc
gcgatccacaaggcaaatcatcccgataccgagcatcattgcactgatatccgctcgccc
ttcctgccgcgcaccgcgacccgcggccgcccggtcggcggcgcgtggttctcgcccgat
tgcaaggaatacagcaaggcgaagggcgggccggtcaaggatcgctccatccgggcgctc
tgctgggaggtcattcactggctcgaagagacccttcccgcggtcggatatctcgagaac
gtcgaagagttcgaatatgccgctccgctcgacggaaacggcgtgcccatgcccgacaag
aagggccgagagttcaagcgcttcgtccgatcgatccgcaggctcggttatcgggtgcaa
tggcgcgtgctgagggcgtgcgactatggcgccccgacctcacgcaagcgcctctacatg
atcttccggcgcgacggtaacgcgatcgtctggccgaaaccgacgcatgccgcaccgacc
gatcgccgcgtcatcgcgggcatgttgctgccgtatcgcaccgcggccgagtgcatcgat
tggacgatcgattgcccctcaatctttgagcgcgaccgcgagcttgccgaagcgaccaag
cgccgcatcgcgcacggcgtcatgcgctatgtcgtgctggccgagcgcccctatatcgtg
ggccgcgacggcactcgatggaagccgaccggtgcgcctcatatcactaagttccgcggc
ggcgcggtcggcagtgacatgacccagccgatgccgacagtcaccgcgaacggcgtcccg
gctcgacctgccggcgcgacgccgctcgggttggtcgacactgtgatcgcgccgctaatt
tcctatgggcagcaaggcggcctcaatcgcccgattgacaagccgatgcacgctgtcacg
gcgtcgaaaaaggacacaaacggcgtcgtaggcgccacgctcgtgaagatgggcaatggc
gagcgcgatggacaggccccgcgcgccctcgaccctcgcaagccctacgggacggtcact
gccaaggggtcacaggccgctgcggtcaccgcgttcctgtcgagcttctacggcagcgac
aaggccgcggctgggggcgatccggaattgccgctgcgcaccgcgcgcgcgggcggacag
catcacgccgtcgtcgccgcccatatcgagcaggcgaatactggcatggtcggtcacacg
ccccgtaagcctctctcgacgatcgtcggcaagggatgcacccagcgcatcgttgaaacg
acaatgatcgaagagggcgcgttgccgcccgaaatgatggcgcgcgcagttcgcacggcc
gcctttctggtcaagtactacggcacggacggcgagaatgagacggcgcagatccagcca
gtcgaccgcccgctcgacgtcgtcaccgtcaaggcgcgctttgccgtcgtcacggtcacg
atcgacgccacgacctatgtcatcgtcgatatcggcctgcgcatgctgaaaccccgcgag
ctcgcccgcgcgcagggcttcccggacgattatgttcttgatcccgtcgtccgcaaattc
gtgcgcggcaagtgggtcgagaagcgcctcacaattgccgagcagatcagtgcgatcggc
aacagcgtttgtccgcccgtcgcccgggcgctcgtgtccgcgaaccagccggacctctgc
aactggcagccggaggcgctggcagcatga
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